Typha angustifolia (narrow-leaf cattail): 140767331
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Entry
140767331 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140767331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140767331
Spliceosome [BR:
tang03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
140767331
Complex B
140767331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
Motif
Other DBs
NCBI-GeneID:
140767331
NCBI-ProteinID:
XP_072963296
LinkDB
All DBs
Position
1:join(9253326..9253657,9253738..9253780,9258567..9258751,9260480..9260624,9261014..9261040)
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AA seq
243 aa
AA seq
DB search
MSMRLAILLAEAISLLSPLSSDLNLHYPFQLHPPKSHHGSDWQLIHGPLHGLGPFPDAIL
YIYLQLALVHLRLNLSPPDNTFSLQTSSLCSWSFSIRGGEQVRVVSYAMPRHYCDFYDTY
LAHDSENLGQAAAFQQVGASFNQHLSLPGNMWRPRFPVLPPPILPLGASSAPLIPVVSPL
FCQTQTRRLCLDGFRDDQSILRVTEIRNLLQKQRIAESSEKNISNRVVDIKGYLSNRASL
AEQ
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgagattagcaatcctgttggccgaggcaatctcactcctctctccactctca
tcggatctcaacctgcactatccgttccaactgcatcctccgaaatctcatcatggatca
gattggcaattgatccatgggcctctccatgggctcgggcctttcccagacgccattctc
tacatatatcttcagttagctctagttcatcttcgcctcaacctttcaccccccgacaac
accttctctctacaaacttcgtctctttgttcctggagcttctccattagaggaggagag
caagttcgagtggtctcctacgccatgcctcggcattactgcgatttctacgatacttac
ctcgcgcacgattctgagaatctgggacaggctgcagctttccaacaagtaggtgcctct
tttaatcaacatctctctctgccaggaaatatgtggaggcctcgttttccagttttgcca
cctccaattttgccattgggagcatcttctgcacctctaattccggtagtcagtcccctc
ttttgccaaacccagaccagacgactttgtcttgacggtttcagagacgatcaatcaatt
ttaagggttacagagattagaaacttattacagaagcaacgaatcgcagaatctagtgag
aaaaacatttcaaatagagtcgtggatatcaagggttatctatctaatcgagcatctctg
gcagagcaatag
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