KEGG T11061: 140768035

Typha angustifolia (narrow-leaf cattail): 140768035

Entry

140768035         CDS       T11061

Name

(RefSeq) protein argonaute PNH1-like

K11593

eukaryotic translation initiation factor 2C

Organism

tang Typha angustifolia (narrow-leaf cattail)

Brite

KEGG Orthology (KO) [BR:tang00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140768035
   03036 Chromosome and associated proteins [BR:tang03036]
    140768035
Messenger RNA biogenesis [BR:tang03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     140768035
Chromosome and associated proteins [BR:tang03036]
Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    140768035
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     140768035
   microRNA pathway
    RISC loading complex
     140768035

SSDB

Motif

Pfam:

Piwi ArgoN PAZ ArgoL1 ArgoMid ArgoL2 IFRD_C

Other DBs

NCBI-GeneID:

140768035

NCBI-ProteinID:

XP_072964218

LinkDB

Position

10:join(12872161..12872541,12872628..12872836,12872914..12873060,12873155..12873288,12873392..12873501,12873738..12873844,12873960..12874098,12874200..12874316,12875275..12875382,12875507..12875578,12875691..12875813,12875973..12876132,12876259..12876380,12876490..12876627,12876721..12876863,12877315..12877377,12877540..12877603,12877677..12877812,12878007..12878080,12878686..12878780,12878858..12878889,12879132..12879301)

AA seq 947 aa
MLAVVEREPTCFHPSPYATEMPLRQMTKEPKKKPLQNSMNQQKLESECSLQEAKKNAGRR
RKGGRGKAVERPVRQELETGLDNGPPVSSKGLGFHRRPGFGKVGTRCIVKANHFLAEVPD
KDLNQYDVTITPEVRSRSMNRTIIAELVRLYRETELGLRLPAYDGRKNLYTAGFLPFHSK
EFVVKLAEEDEGMGITRQKEYRVAIKFVARADLHHLRQFIAGKQADAPQETLQVLDIVLR
ELSNQRYVSIGRSFYSPEIRKPQRLGDGLQSWCGFYQSVRPTQMGLSLNIDMSSAAFIEP
LPVIEFVAQILGKDVILRPLSDADRIKIKKSLRGVKVEVTHRGNVRRKYRISGLTSQPTR
ELIFPVDDQMNMKSVVEYFKEMYGFTIQHSHLPCLQVGNQKKPNYLPMEACKIVEGQRYT
KRLNEKQITSLLKVTCQRPREQEMDVLQTVHQNEYGQDPYAKEFGINISDKLTSVEARVL
PAPWLKYHDTGKEKECLPQVGQWNMMNKKVINGCRVNYWACINFSRSVQESIVRGFCQEL
AQMCQISGMEFNREPVIPIYSAQPEQVEKALKHVYNAAINKLRGKELELLLAILPDNNGS
LYGDLKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISWRIP
LVSDIPTIIFGADVTHPETGEDSSPSIAAVVASQDWPEVTKYAGLVCAQPHRQELIQDLF
KTWHDPQKGTVTGGMIRELLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKA
CASLEPNYQPPVTFVVVQKRHHTRLFANNHKDRSSTDKSGNILPGTIVDSKICHPTEFDF
YLCSHAGIQGTSRPAHYHVLWDENKFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHL
AAFRARFYMEPEISDNPKSKSTRTTNGSSVKPLPALKEKVKRVMFYC

NT seq 2844 nt +upstreamnt +downstreamnt
atgcttgcggtggtagagagagaacccacctgcttccatccttccccttatgctaccgag
atgccattgcggcagatgaccaaagaacccaagaagaagccactgcagaactcgatgaac
cagcagaagctcgagagcgagtgctccctgcaggaggccaagaagaacgcgggcaggaga
cggaaaggagggagagggaaggcggtggagagaccagttaggcaagagctggagactggt
ctcgacaacggccctcccgtctcaagtaaaggtcttggcttccatcgacgtcctgggttc
ggcaaggtgggcaccaggtgcattgtgaaggccaatcatttcctcgccgaggtgcccgat
aaagatttgaaccagtatgatgtcacgattacgccggaagtgaggtctcggagtatgaac
agaactatcatagccgaattggtgagattgtacagggagacggagttgggtttgaggctt
cccgcgtatgatggacggaagaacctatatacagccgggttccttcctttccattcaaag
gagttcgttgtaaagctcgccgaggaagatgaaggaatggggattactagacaaaaggag
tatagagtggctatcaagtttgtagctcgtgccgaccttcaccatctacgccaatttatt
gctgggaagcaagctgatgcaccgcaagaaacgctgcaggttcttgatatagtattgaga
gagttatcaaatcaaagatatgtctctattgggagatccttctattctccggagatcaga
aaaccacagaggctgggtgatggattgcagtcatggtgtgggttctatcagagcgtcaga
ccaactcaaatgggtctctctctcaatatcgatatgtcctccgctgccttcatcgaacca
ctccccgtgattgagtttgtggctcaaatcttagggaaagatgtcatcctgaggccattg
tctgatgctgatcggatcaagattaagaaatctctccgaggtgtgaaagttgaagtcaca
catagaggaaatgtgaggcggaaatatcgaatttctgggctgacatcgcaacctacccgt
gaacttatcttccctgttgatgatcaaatgaacatgaaatctgtggttgagtacttcaaa
gaaatgtatggcttcacaattcagcattctcatcttccttgtctccaagtgggaaatcag
aagaaaccaaattatctgccaatggaggcctgcaaaattgttgaggggcagaggtacaca
aagagattgaatgagaagcagattacttccctgctaaaagtcacatgccaaaggcccaga
gagcaggagatggatgttttacagacagttcatcagaacgagtacgggcaagatccctat
gcaaaggaatttgggatcaacatcagtgataaacttacttctgttgaagcacgggttctt
cctgcaccatggctaaaatatcatgacactggaaaagaaaaggagtgtttacctcaggtt
ggtcaatggaatatgatgaataagaaagtcataaatggatgtagagtgaattactgggcc
tgtattaacttctcgagaagtgttcaagaaagcattgtccgtggattttgccaagagtta
gcacagatgtgccaaatttctggcatggaattcaaccgggagcctgtaatcccaatttac
tctgcacagccggagcaagtagagaaggctcttaaacacgtgtacaatgcagcaataaat
aaactcaggggaaaagagctagagcttcttttggctatcctaccggataacaatggttct
ttatacggtgatcttaaaagaatatgtgagactgatttgggattgatttcccagtgttgc
ttgaccaagcatgtttttaagatcagcaaacaatacttggcaaatgtctctcttaagata
aatgtgaagatgggtggaagaaatactgtacttttagatgctataagttggagaattccc
ttggtcagtgacataccgaccataatatttggtgctgatgtaactcatcccgaaactggg
gaggattctagtccatctattgctgcagttgtcgcttcacaagattggcctgaggttaca
aaatatgctggacttgtatgtgcccagcctcatcgtcaggaactcattcaggatttgttc
aagacatggcatgatcctcaaaagggtactgttacaggaggcatgatcagggagcttttg
atttccttcaggaaagcaactggacagaagccattgaggataatattttatagggatggt
gttagtgaaggacaattctatcaagtcctgctatatgaattagatgcaattcgtaaggcc
tgtgcgtccttagaaccaaactaccagcctcctgtgacatttgtggttgttcagaagcga
caccataccagactatttgcaaacaaccacaaggacagaagtagcacggacaagagtggc
aatatcctgcctggcaccatcgtcgattccaagatatgtcatcctactgagttcgacttc
tacctttgcagtcatgctgggatccagggaactagtcggccagctcattaccatgttttg
tgggatgagaataagtttactgcagatgaaatgcagacactgaccaataatctttgctac
acgtatgctcggtgcacacgctctgtttctgttgtgccacctgcatactacgctcatcta
gcagctttccgggcccgtttctacatggaaccggagatatccgacaacccaaaatccaag
agcactcgcacgacaaatggatcctccgtgaagcctttgccagcgttgaaagagaaggtg
aagagggttatgttctactgttga

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