Typha angustifolia (narrow-leaf cattail): 140768228
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Entry
140768228 CDS
T11061
Name
(RefSeq) probable ion channel CASTOR isoform X1
KO
K21866
ion channel POLLUX/CASTOR
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tang02000
]
140768228
Transporters [BR:
tang02000
]
Other transporters
Pores ion channels [TC:
1
]
140768228
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Ortholog
Paralog
GFIT
Motif
Pfam:
Castor_Poll_mid
Slo-like_RCK
TrkA_C
Paratox
Motif
Other DBs
NCBI-GeneID:
140768228
NCBI-ProteinID:
XP_072964520
LinkDB
All DBs
Position
10:join(7634747..7635193,7638592..7638663,7639236..7639838,7641212..7641394,7641553..7641612,7641692..7641895,7645239..7645487,7647640..7647738,7650471..7650665,7650804..7650896,7651902..7652156,7656514..7656732)
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AA seq
892 aa
AA seq
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MSSFDSEPSPPPPLHRDWFFPSAPPYLSPLRTLTKPRKPSLFPSTRRASKHYLRDSRSQR
PPAAPPLPARSASGLSSGSFSSSQPPPPPSIPRRDQRYAGVRRKVCFDVTLKKDEKTRSD
SGKSAMEHNSTGVKLGAGKIGWPAAVSTALIIMCFASLLHKNFSLQNQVIDLQDQLVVIK
SRLQSRLVDSYLDIDEIVSHESSYMYKSLKNSSIVLSLAMLSIPLVIIKYIDCLSMLRKS
AESEEVPLNKQLAYRVDVFLSVHPYAKPLALLFATLLLICLGGLALFGATDHSFADCLWL
SWTYVADSGNHANSVGVGPKLVSISISFGGMLIFAMMLGLVSDAISEKFDSLRKGKSEVV
EKNHTLILGWSDKLGSLLNQLAIANESLSGGIVVVMAERDKEQMESDIAKMEFDFKGTSV
ICRSGSPLILADLKKVSVSKARAIVVLAEDGNADQSDARALRTVLSLIGVKEGLRGHIVV
ELSDLDNEVLVKLVGGDLIETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKR
WPQLDGMRFEDVLISFPDAIPCGIKVASYGGKIILNPDDSYVLQEGDEILVIAEDDDTYA
PTTLPKVGRGYLPKDFVLPKSPETILFCGWRRDMEDMIMVLDAFLAPGSELWMFNDVPEN
ERAGKLAAGGLDLSRLENITLVNREGNAVIRRNLESLPLESFNSILILADESVEDSAIQA
DSRSLATLLLIRDIQAKRLPVVSHLHRGSFSQVSWIGEMQQASVKSVIISEILDPRTKNL
LSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMQIRSADLYLQEEEEMN
FFEIILRARQRKEIVIGYRLENAERAIINPPGKGVPRRWSSRDIFVVIAEKE
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccttcgactcggagccatcgccgccgcctcctctccaccgagactggttcttc
ccctccgccccgccttatctctcccctctccgaacactaacaaagcctagaaagccctcc
cttttcccctccaccagaagggcttccaagcactacctccgcgattccaggtcgcagcgg
cctccggcggcgccgccactgccggcgaggtcagcctcgggattatcgtctggatctttc
tcgtcatcccagccgcctccaccgccgtcgatacctcggagggatcagaggtatgctggg
gtccgccgcaaggtttgcttcgatgtcactttgaaaaaggatgagaagacgagatcggac
tctgggaagagcgcaatggagcataattcgacgggtgtgaagttaggagcggggaagatc
ggatggcctgcggcggtctccacggcgctcattatcatgtgctttgcttcacttctgcac
aagaacttctcattacagaaccaggttatagatttacaggaccagcttgtcgtcatcaaa
tcaagactacagtcgcgtcttgtagattcatacttggatattgatgagattgtatcacat
gagagcagttacatgtacaaaagtctaaagaattcttctatagtgttgtcacttgctatg
ctgtccatcccactagttattatcaagtatattgattgcttgtcaatgttaaggaagtca
gcagagtctgaagaagttcccctaaacaagcagttagcttatcgtgtggatgtattttta
tcagtccatccatatgcgaagcctttggctctactatttgcaactctgttgctgatatgt
cttggtggtttggcactttttggtgcaacagatcatagctttgcagactgtttgtggctg
tcttggacttatgtagctgattctggtaatcatgcaaattctgttggtgttggtcctaag
ttagtttcaatcagcataagttttggtggaatgttgatatttgccatgatgcttgggctt
gtctctgatgcaatttctgagaagtttgactcgttaaggaagggaaaaagtgaagtggta
gaaaagaatcacacactaatccttggttggagtgacaagctggggtctttactgaatcaa
cttgctatagccaatgagagtttgagtggtggcattgtggtagtgatggctgagagagac
aaggagcaaatggaatcagatattgccaaaatggaattcgactttaaggggacatctgta
atttgcagaagtggaagccctctaattcttgctgacctgaaaaaggtgtctgtttctaag
gctcgtgcaattgtagttttagctgaggatggaaatgctgaccagagtgatgcacgagct
ttacgaactgttttgagcttaattggggttaaagaagggctaagaggacatatagtggtg
gaacttagtgatcttgataatgaggtattagttaaacttgtaggtggggatcttattgaa
actgttgttgcacacgatgttattggtcgactgatgatacaatgtgctcgtcaaccaggt
cttgctcagatatgggaggatatacttgggtttgaaaactgtgaattctacatcaaaaga
tggccccaattggatggaatgcgctttgaagatgtactaatcagttttcctgatgccatt
ccctgtggtataaaggtggcatcttatggtggaaagatcattttaaatcctgatgattcc
tatgttctacaagagggggatgagatactagtaattgctgaagatgatgatacctatgca
ccaacaacattgcctaaggtcgggagaggctatcttcccaaagattttgttcttccaaaa
tctccagaaactatactattttgtggttggcgcagagatatggaagatatgattatggtg
ttggatgcttttctagcaccaggatcagagttgtggatgtttaatgatgtacctgagaat
gagagggctggaaagctagcagctggcggtctggacttaagtcgccttgaaaatataact
ttggtcaaccgggagggaaatgcagtcattcgtcggaatttagagagtcttcccctagaa
tcatttaattcaattttgattttggctgatgaatctgttgaagactcagcaatacaggct
gattcaaggtctcttgcaaccttactgctcatcagagatattcaggcaaagcgacttcct
gtggtctcacaccttcatagaggaagcttctcccaagtttcttggattggggaaatgcag
caagcatctgttaaatctgtcataattagtgaaattctggatcccaggacaaagaattta
ttgtccatgtcaaagatcagtgattatgttttatcaaatgaactggtgagcatggcgcta
gcaatggttgcagaagaccgccaaataaatgatgtattggaggaactatttgcagaagag
ggaaatgaaatgcagatacggtctgctgatctctaccttcaggaggaggaagagatgaac
ttctttgaaattattttacgtgctagacaaaggaaagagattgtaattgggtaccgtctt
gaaaatgctgagcgtgccatcatcaatcctccaggcaagggtgtaccgcgaaggtggtca
tccagggacatttttgttgtcatagctgagaaagaatga
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