Typha angustifolia (narrow-leaf cattail): 140768318
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Entry
140768318 CDS
T11061
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00240
Pyrimidine metabolism
tang01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
140768318
Enzymes [BR:
tang01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
140768318
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
140768318
NCBI-ProteinID:
XP_072964670
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All DBs
Position
10:join(1565998..1566006,1566108..1566213,1567276..1567386,1569013..1569095,1570757..1570816,1571030..1571090,1571466..1571572,1572031..1572108,1573660..1573705,1573797..1573917,1574508..1574593,1574751..1574834,1575686..1575708)
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AA seq
324 aa
AA seq
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MEKDLNGGGGLIKISPEVYDALSCGKAVVALESTIISHGMPYPQNLQTAKAVEAIVRKNG
ATPATIAILDGTPYVGLNHEQLERLAILGRKAQKTARRDIPFVVAAGGNGATTVSATMFF
ASKVGIPVFVTGGLGGVHRHGEQTMDISSDLTELGKTPVAVISAGVKSILDIPRTLEYLE
TQGVTVAAYKTDEFPAFFTESSGCKAPCRLNTPEECAKLIDANLNLRLENGILIAVPIPK
EYAASGNMIESAIQKALQEAKDNNVIGSAATPFLLNRVNQLTGGASLAANIALVKNNALV
GAKVAASLANLRRSINKGPGRSAL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagatttgaatggaggaggagggcttataaaaataagcccggaagtttacgat
gcactttcgtgtgggaaagctgttgttgctttggaatctacaataatttctcatggtatg
ccctatccacaaaatcttcaaactgctaaagctgttgaggctattgtgaggaagaatgga
gctactcctgcaacaattgccattttagacggtactccatatgttggcttgaaccatgaa
caacttgagaggcttgctattcttggaagaaaagctcaaaagacagctcgcagggatatt
ccatttgttgttgctgctggtggtaatggtgcaacaactgtttcagcaaccatgtttttt
gcttctaaggttggtatacctgtttttgttactggaggacttggaggagtacatagacat
ggggaacaaacaatggacatttcatctgatctcactgaacttggaaagactccagtagca
gttatatcagctggtgtgaagtcaattctagatattccgagaacccttgaatacctggaa
actcaaggggttacagttgctgcttataagacagatgagtttccagcatttttcactgaa
tctagtggatgcaaggcgccctgtcgtctgaatactcctgaggagtgtgcaaagctcatt
gatgcaaacttgaatttaagacttgagaacgggattctaattgccgtgcctattcccaaa
gaatatgcagcttcaggaaatatgatagaatctgcaatacaaaaagccctacaggaagca
aaggataataatgtgataggcagtgctgccacaccgttcttgcttaacagagtaaatcaa
cttactggaggagcgtcattggcggctaacattgcacttgtgaagaacaatgctctcgtc
ggtgcaaaagttgcagcatctcttgccaatcttagacgaagtataaacaagggtcctgga
aggtctgcattgtag
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