Typha angustifolia (narrow-leaf cattail): 140768451
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Entry
140768451 CDS
T11061
Name
(RefSeq) protein HIRA-like isoform X1
KO
K11293
protein HIRA/HIR1
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tang03036
]
140768451
Chromosome and associated proteins [BR:
tang03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
140768451
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
140768451
NCBI-ProteinID:
XP_072964821
LinkDB
All DBs
Position
10:complement(join(10060834..10061007,10062432..10062549,10063333..10063455,10063600..10063840,10063966..10064176,10064955..10066020,10066123..10066520,10066628..10066879,10067014..10067289,10068152..10068259))
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AA seq
988 aa
AA seq
DB search
MITEKPSWVKHEGLQIFSIDIQPGGLRFATGGGDQKVRIWNMKSVGKDSDNDNPTQRLLA
TLRDHFGSVNCVRWAKHGRFLASGSDDQMILIHERKPGSATSEFGSGEPPDVENWKVVRT
LRGHTADVVDINWSPDDLTLASGSLDNTVHIWNMTTGICSAVLRGHSSLVKGVAWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTEGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPIIVVKFNHTLFRKHFSNGQEAKVASSGWTNGTSKTTT
KELQPYNVIAIGSQDRTITVWTTASARPLFVAKHFFTQSVVDLSWSPDGYTLFACSLDGT
VATFNFEVKELGHRLTDAELDELKRNRYGDVRGRQANLAESPAQLLLEAVSARQSPVKKG
TSSAQQNHISGEVSVDLQNSITSQPIQKVPEAQLEIAKKAGEANIDGLSKVGSGRLSSPV
KQREYRRPDGRKRIIPEAVGYPANQENLSSCGQSQLIDFSSLALDQQKDDQGKLVGNSGT
KEASLKRPFIGSTDANNLAGKCNSCGVRERSGVTARANISETLVIEKASGSTSNDGRMSI
EHSGSVGLPGSLTACNALSIRVYNRKDNDDTLPVCLEAKLVERSLSDVIGVGNTFVTKQT
EISCTKGNETLWSDRISGKVTVLAGNANIWAVGCEDGYLQVYTNCGRRAMPAMMVGSAAV
FIDCDECWKLLLVTRRGSLFVWDLFNKTCLLHDSLASLVTSREDSSAKDAGVIRVISARF
SRSGSPLVVLATRHAFLFDMSLMCWLRIADDCFPASNFASSFSLCSLQGGELGKLQVDVG
KFMTRKPSWSRVTDDGMQTRAHLETQLAASLALKSPHEYRQCLLSYIRFLAREADESRLR
EVCESFLGPPTSMVEAASVDQKNPSWDPYVLGMRKHKLLREDILPSIASNRKVQRLLNEF
MDLLSEYEVAETNADQMVVVLPATDGNA
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgatcacggagaagccgagctgggttaaacatgaggggcttcaaatcttctccattgac
atccagccgggaggtcttaggtttgcaaccggtgggggagaccaaaaggttcgaatctgg
aatatgaaatcagtaggtaaggactctgacaatgacaatcctacccaaagactgctcgca
actctccgtgatcattttggatcagtcaattgtgtaaggtgggccaagcatggacgcttt
cttgcttccgggtctgatgatcaaatgattctaattcatgaaagaaaaccgggttctgct
acatctgagtttggcagcggagagcctccagatgttgaaaattggaaagttgtgagaact
ttaagaggtcatactgcagatgtagtggatattaattggtccccagatgacttaacattg
gctagtggcagtttggacaacactgttcacatctggaacatgacgactggtatctgctct
gccgttctgagggggcattccagcttagttaagggggttgcttgggatcctattggttct
tttattgcgagccagtcagatgacaaaactgtcataatatggcgcactagtgactggagt
cttgctcataggacagaagggcattgggcaaaatctcttggttcaacattttttaggcga
ctaggttggtcaccttgcggccactttattactacaactcatggttttcaaaaaccaagg
cactcagctcctgtgctagaaagaggcgaatggtctgccacctttgactttctaggccat
aatgcacccattattgttgtgaagttcaatcacacgttgtttaggaagcatttctccaat
ggccaagaggcaaaggttgcatcttctggatggactaatggaacatcaaagacaacaaca
aaagaattacaaccatacaatgtaatagctattggaagtcaagatcgcaccattactgtt
tggacgacagcgagcgctcggcctttatttgttgccaagcatttcttcacacaaagtgtt
gttgatctgtcatggagcccagatggatatacactttttgcctgctccttggatggaacg
gtggctactttcaattttgaagtgaaagagctcggacacaggttgactgatgctgagctg
gatgagttaaagagaaatagatatggtgatgttagaggaaggcaagcaaacttagctgaa
agccctgcacagttgctgctagaagcagtttctgccaggcaatcacctgtcaaaaaagga
acttccagtgctcagcaaaaccatatatctggggaagtttctgtagatttgcagaactca
attaccagtcagccaattcagaaagttcctgaagcccaattggagattgcaaagaaagca
ggagaggccaacatcgatggtttaagtaaagttggatctggccggttatctagtcctgtg
aaacagagagaataccggcgtcctgatgggagaaaaagaataattccagaagctgttgga
tatcctgccaatcaggaaaatctctctagctgtggtcagagtcaattgatagacttctct
tcgttggccttggatcaacaaaaggatgatcaaggaaaacttgttggaaatagtggaaca
aaagaagcttccctaaagagaccatttattggaagcactgatgcaaataatcttgctggg
aaatgcaattcttgtggggttagagagcgctctggtgtcacagcaagggctaacatcagt
gaaactcttgttattgagaaggcttcaggctctactagcaatgatggaaggatgagcata
gagcactcaggctctgtaggcttgcctggttctctgactgcctgcaatgctctttctatt
cgtgtatacaataggaaggacaatgatgatactttaccagtttgcttggaggctaaactt
gtagagcggtctttaagtgatgttattggtgtaggaaatacctttgtcacaaaacaaact
gaaattagttgcactaaaggaaacgaaaccctttggtctgaccgaatatctggaaaagta
actgttttggctggcaatgccaacatctgggctgttggttgtgaagatggctatctacag
gtttacacaaattgtggaagacgagcaatgccagcaatgatggtggggtctgcggcagtc
tttattgattgtgatgagtgttggaagttactccttgtcacaaggagaggatcgctattt
gtttgggatcttttcaacaagacatgtcttctgcatgactctttagcttcactagtcacc
tcacgggaggattcatcggcaaaagatgctggcgtaatcagagttatatctgcaaggttc
tcgagatctggttcacccttggttgttcttgccacccgtcatgcttttctttttgacatg
agtctgatgtgttggttacggatagcagatgattgtttccccgcttcaaattttgcaagc
tcctttagcttatgttctctccaaggtggtgaactgggaaaattgcaggtagacgtcgga
aagtttatgactagaaagccaagttggagcagggtcacagacgatggtatgcagacacgt
gctcatttagagacacagttggccgcatccttggcgctgaaatcaccccatgaatatcgc
caatgccttctttcttatatccggtttttggcaagagaagcagatgagtcccgtttgcgt
gaagtttgtgagagttttcttggccctcccacaagcatggtggaagctgcatctgttgac
caaaagaacccatcatgggatccttatgtgcttggaatgagaaaacacaaactcctaaga
gaagatatcctgccatccatcgcatcgaaccggaaagttcagcgattgcttaatgagttc
atggaccttctctctgagtatgaagttgctgaaactaatgcagatcaaatggttgtggta
ctgcctgcaactgatggcaacgcgtga
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integrated database retrieval system
