KEGG   Typha angustifolia (narrow-leaf cattail): 140768588
Entry
140768588         CDS       T11061                                 
Name
(RefSeq) uncharacterized protein
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140768588
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140768588
   03041 Spliceosome [BR:tang03041]
    140768588
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     140768588
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     140768588
Spliceosome [BR:tang03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    140768588
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 140768588
NCBI-ProteinID: XP_072965019
LinkDB
Position
10:join(12096414..12096673,12096815..12096855,12098934..12099097,12099223..12099325,12099393..12099562,12100487..12100879)
AA seq 376 aa
MEGFAEDNEKAVNGYEEVEEEEEVEEEVEEEVEEEVEEEEEEEEEEGGGDGDGGERCGDE
DKGMGVDNVDSTGEEMKQSVSDSSSSGKIFVGGVAWDTTEDTFTKHFEKYGAITDSVIMK
DKHTHLPRGFGFVTFVDPSVIDKILEEEHVIDGRTVEVKRTVPREDISSKAGPKSRKIFV
GGIAPSLTEDELKEHFSSYGEVVEHQIMLDHSTGRSRGFGFVTFADEEAVEKVISEGRMH
DLGGKQVEIKKAEPKKPGADSGFSGRNTYGTGSSRGAYRGGAYGYGGGYRSGGGDYYGGS
AGYGYGRGYEYGAAGFVGGYGSGFGGNMYGGGGYGGYGGGSGVGGGAYGVPGGYGGAYGS
YGGGRGYGSRYHPYGK
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggaggggtttgcggaggataacgagaaggccgttaatggttacgaggaggtagaagag
gaagaagaggtggaggaggaagtggaagaggaggtggaagaggaggtggaggaggaagag
gaggaggaggaggaggagggaggaggtgatggtgatggaggagaaaggtgtggggacgag
gataaggggatgggagtagataacgtagatagtaccggcgaggagatgaagcaatctgtt
agcgattcgtcttcttcaggaaaaatctttgttggaggtgttgcgtgggacacaactgaa
gacaccttcaccaagcattttgagaagtatggagcaatcactgactctgtgattatgaag
gacaaacacacacatttgccacggggatttggatttgttacatttgttgatccatctgtt
attgacaagattttggaagaagaacatgtcatagatggaagaacggtagaagttaagagg
acagtcccaagagaagacatatcatcaaaagccggccccaagtcaaggaagatcttcgta
ggggggattgccccatctctaacagaagatgagttgaaggagcatttttcctcctatggt
gaggtagttgagcaccagataatgcttgaccacagcactgggcggtctcgaggctttggc
tttgttacttttgcagatgaagaggcagttgagaaagtcatctcagagggtagaatgcat
gatcttggagggaagcaggttgaaatcaagaaggctgaaccaaaaaaacctggtgcagat
tcaggttttagtgggaggaatacttatggaactggtagctcccgaggagcttatagaggt
ggcgcatatgggtatggaggtggttaccggtctggtggaggagactattatggtggaagt
gcaggctatggatatggcagaggttatgaatatggcgctgctggctttgttggaggttat
ggctctggttttggagggaacatgtatggaggtggtggatatggtggatatggtgggggc
agcggtgttggtggtggtgcatatggtgtcccaggtggatatggtggagcatatggtagt
tacggcggtggccggggatatggcagcagataccatccctatggaaaatga

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