Typha angustifolia (narrow-leaf cattail): 140768709
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Entry
140768709 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140768709
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140768709
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140768709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
Zn_ribbon_6
zf-rbx1
Prok-RING_4
zf-RING_10
RING_XB3-XBAT31
Sina_RING
Rad50_zn_hook
TRAF3_RING
zf-RING_4
zf-Nse
zf-RING_6
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
140768709
NCBI-ProteinID:
XP_072965186
LinkDB
All DBs
Position
10:complement(join(2869783..2870019,2871326..2871456,2873924..2874002,2874326..2874613))
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AA seq
244 aa
AA seq
DB search
MSTLGATKRPSKRHARDSSRAKMVLNLDLNSPAPVEGREGASTSANIRVNTQRSRSFGRQ
QGAVPAFNLGLNNSPIDVEAIDDEVEMVFFSRLAPQTRSQPTRSQSVTVVLDEDVEINPR
RSGAIIEDPVTTLSLGTHNKRERIPPNKNIINCDLYLDLDEGYSAKKKNSMQPNPEPVKV
VPKEPTFTCPVCMNTLVEASSTICGHIFCQSCIKASIQAQKKCPTCRRKLTMNNFHRVYL
PTTD
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcttggggcaacgaagcgaccgtcgaagaggcacgcgagggacagttcgcgc
gctaagatggttctgaacctagatctgaattctccggctccagttgagggccgggagggg
gcttccacttctgctaatatccgcgtcaatactcaacggagtcgcagctttgggcgtcag
caaggggcggtgccggcgttcaatttggggttgaataattcacctatcgatgtggaggct
atcgatgatgaagtggagatggtctttttctcaagattggctcctcaaacaaggagccag
cctacaaggagccaatctgtcacagtagttttagatgaagatgtggagataaatccaaga
cgctcaggggccatcatagaggatcctgtgaccactttatctctcggcactcacaacaaa
cgtgagaggataccaccaaataagaacataatcaattgtgatctttatttagatctggat
gaaggttacagtgctaagaaaaagaattccatgcaacctaatccagaacctgttaaagtg
gttccaaaggaacccacctttacctgtcctgtctgtatgaacacgttggttgaggcatca
tcaactatttgtggccatatcttctgtcaaagctgcatcaaagcttccatccaggcacaa
aagaaatgccccacttgcaggaggaagctcactatgaacaattttcaccgggtgtacctt
ccgacgaccgactga
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