Typha angustifolia (narrow-leaf cattail): 140768729
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Entry
140768729 CDS
T11061
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
140768729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tang03400
]
140768729
Enzymes [BR:
tang01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
140768729
DNA repair and recombination proteins [BR:
tang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
140768729
Prokaryotic type
140768729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
LED_rpt
Motif
Other DBs
NCBI-GeneID:
140768729
NCBI-ProteinID:
XP_072965220
LinkDB
All DBs
Position
2:complement(join(8274504..8274570,8274764..8274847,8275200..8275335,8275565..8275595,8275790..8275948,8276893..8277113,8277184..8277439))
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AA seq
317 aa
AA seq
DB search
MASSPKTLAELFHPAKRLRSLSASSPETLIPKSSISAFPTPPPSSSSSDAGNLLPEQKKR
IEINKSIARSRRNLKLCAERVEKAKGEGMDYVKLEDLLVEETWLEALPGELQKPYSKNLC
RFLEREMRGNVPIYPPPQLMFNALHSTPFDQVKAVIIGQDPYHGPGQAMGLAFSVPEGIK
IPTSLVNIFKELQKDVGCSVPSHGNLERWAVQGVLLLNAVLTVRNHQANSHAKKGWEPFT
DAVIRTISQKKSGVVFLLWGNSAQEKTRLIDESKHHILRAAHPSGLSANRGFFGCRHFSQ
TNQILERLGFSPIDWQL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcccccaaaaccctagccgagctcttccaccccgcgaagcgtcttcgatcc
ctctccgcctcctctcccgaaaccctaatccccaaatcatccatatccgccttccccacc
cctcctccctcctcctcctcctccgacgccggaaatctcttgccggagcagaagaagcgg
atcgagatcaacaagtcaatagcaaggtcgaggaggaatctgaagctctgcgccgagaga
gtcgaaaaagctaaaggtgaaggaatggattacgtgaagctggaggatcttttggtggaa
gagacgtggttggaagcgctgcctggtgagctccagaagccgtattctaagaatctgtgc
aggttcttggagcgagaaatgcgaggaaacgttccgatctatccgcctccgcagcttatg
tttaatgcgttgcattcaacgccgtttgatcaagtaaaggcggtgatcattgggcaggat
ccatatcatggccctggtcaagccatgggccttgctttctccgtaccagaggggataaag
attccaaccagcttggtaaatatatttaaggaacttcaaaaggatgttggttgttctgtg
ccatcacatggaaatcttgaaagatgggctgtgcagggcgttcttctgctcaacgctgta
ctcactgtgagaaaccatcaagctaattctcatgctaagaaaggatgggagccatttacc
gatgctgtaattcgtacaatttcacagaaaaaatcaggagtggtcttcctcctctgggga
aattctgctcaagaaaagacaagactgatcgatgaatcaaaacaccacattcttagggct
gctcatccatctggcttatctgccaacaggggcttctttggttgcaggcacttttctcag
acaaatcaaatattggagagactgggattttctcccattgattggcaactttag
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