KEGG   Typha angustifolia (narrow-leaf cattail): 140768848
Entry
140768848         CDS       T11061                                 
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03440  Homologous recombination
tang03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    140768848
   03460 Fanconi anemia pathway
    140768848
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tang03032]
    140768848
   03400 DNA repair and recombination proteins [BR:tang03400]
    140768848
Enzymes [BR:tang01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     140768848
DNA replication proteins [BR:tang03032]
 Eukaryotic type
  DNA Topoisomerases
   140768848
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     140768848
   FA (Fanconi anemia) pathway
     140768848
SSDB
Motif
Pfam: Topoisom_bac Zn_ribbon_TOP3B Toprim
Other DBs
NCBI-GeneID: 140768848
NCBI-ProteinID: XP_072965385
LinkDB
Position
10:join(3455559..3455582,3455665..3455721,3462583..3462686,3469343..3469436,3472069..3472168,3472894..3473137,3474333..3474495,3474587..3474706,3483375..3483454,3485256..3485534,3499697..3499865,3500022..3500150,3500266..3500478,3505768..3505947,3506581..3507222)
AA seq 865 aa
MAPPKVLMVAEKPSIALSIASALSGGRMSTRRGSTDVHEFEGMFRGSHAYFKVTSVIGHV
FSVDFPPTYQNWEATDPADLFEAPILKSECNPKAHIHRHLSQEARGCAYLVLWLDCDREG
ENICYEVIECTGIHEAESGRRIYRARFSSVTEKDIFSAMDNLVMPNKDESLSVDARQEID
LKVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITTFKPEKFWSLNP
YFIKDGYEIQLEWDRNKVFDIDVATMFQKMVVADGTLKVTDISTKEECKSRPYGLNTVNM
LKVASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPPSFDFKSALGAQLNNPVWGSD
VRALLADGFHKPRHGSDAGDHPPITPVKSASEDMLGNDAWKLYQYICQHFIGSVCPDCKY
TRSKVELRTGGEIFHCVGHHVTAKGFTSIMPWLAVTEKSLPQFKKGEKISILKVDLYEGS
TTPPDYLSESELISLMEKNGIGTDASIAVHINNICERNYVQVNSGRRLVPTALGTTLIRG
YQCIDPDLCLPDIRSFIEQQITLIAEGKVDHVHVVQHVLQQFMKKYSYFVKKIDNMDALF
EAQFSPLADSGRLLSKCGKCTRYMKYISTQPMRLYCITCEEVYYLPQNGLIKLYKELVCP
LDGFELLLFSLAGPDGKSFPLCPFCYNSPPFEGIDKLFGTLQVGNSGKIGKGAGMPCFLC
PHPTCRHSLITQGVCACPECSGTLVLDPVSAPKWRLYCNMCNCLVSLPEGAHRISTTGKR
CPECDSTIIEVDFNKKSTPLKDGATLHVGCILCDDLLHSLVEMKHGRSFFRRGRGRGRGR
GRGRSRGRGRSGLKNEDPKMSFRDF
NT seq 2598 nt   +upstreamnt  +downstreamnt
atggcaccgcccaaagtcctgatggtggccgagaagcccagcatcgctctctccatcgca
tccgctctttccggcggccggatgtctacacggaggggcagtaccgatgtccatgagttt
gagggaatgtttcggggatctcatgcatattttaaagtgacatctgttattggacatgtc
ttcagtgtagattttccgcctacatatcagaattgggaagcaactgatcctgcggatcta
tttgaggcccctattttgaagtcagaatgcaacccgaaggctcatatccatagacatcta
tctcaagaagctcgaggatgtgcctacttggtactatggttggattgtgatcgtgaaggt
gaaaatatatgctatgaagttattgaatgtactggaattcatgaggctgagtctgggaga
agaatttaccgtgccagattttcatctgttactgagaaggatatattcagtgccatggac
aaccttgttatgcccaacaaagatgaatcattatctgtagatgcacgtcaagagattgac
ctgaaggtaggagtagcatttactcgttttcagacccgctattttcaaggaaagtatggg
aaccttgattccagggttatttcctatggtccatgtcaaacacctactcttggattttgt
gtgcaacgctacttgcaaattaccacatttaaacctgaaaaattctggtcattgaatcct
tattttattaaagatggctatgaaatacagctggaatgggaccgcaataaagtcttcgat
attgatgttgccacaatgttccaaaaaatggttgttgctgatggaactttaaaagtaaca
gatatatcaactaaagaagagtgcaagagccgcccttatggccttaatacagttaacatg
cttaaggttgcatcaagtgcgctaggctttggacctcaaatggccatgcagttggcagag
cggctatatactcagggatttatcagttatccacgtacagagagcacggcataccctcca
tcatttgatttcaaaagtgcacttggagcacaacttaataatcctgtatggggtagtgat
gtcagagcactactagctgatgggttccataaaccaaggcatggatcagatgctggggac
catcctcctattactcctgtgaaatccgcatcagaagatatgttgggaaacgacgcttgg
aagttgtaccaatacatctgccaacattttattggcagtgtctgtcctgattgcaagtat
acgaggagtaaagttgaacttagaactggtggggagatattccactgtgttggacatcat
gttacagctaaaggatttacatctatcatgccatggttggcagttactgagaagagtctt
ccacagttcaaaaagggtgagaaaatcagtattctgaaagttgacctttatgagggaagc
accacacctccagattatcttagtgagagtgaattgatttcactcatggaaaagaatggg
ataggcacagatgcttccattgctgtacacataaacaacatctgtgagcgtaactatgtg
caggtgaattctgggaggaggttagttccaacagcactgggaacaaccttgataagagga
taccagtgtattgaccctgacctctgcttgcctgacatccgcagttttattgagcagcaa
atcactttgattgctgaaggcaaagttgatcatgttcatgtcgtgcaacatgttcttcag
caatttatgaaaaagtattcatatttcgttaaaaagattgacaacatggatgcacttttt
gaagcacagttctcacctttagcagactcagggcgtctgctgagcaaatgtggaaaatgt
actaggtacatgaaatatatttccactcagcctatgaggttatactgtataacatgtgag
gaggtgtactacctccctcagaatggtttgatcaagctttacaaggaactcgtgtgccct
ctcgatggctttgaattgttgctcttctcgttggctggtccagatggaaaatcattcccg
ctttgccctttttgctacaatagtcctccatttgaagggattgacaagctctttggcacg
cttcaagttggaaattctggtaagataggaaaaggggctggcatgccatgtttcctttgc
cctcaccccacatgtcggcattccttgataacccaaggagtatgtgcctgccctgagtgc
agtggaacattagttcttgatcctgtaagtgcacccaaatggaggttatactgcaacatg
tgcaactgccttgtctcccttccagagggggctcatcgtatctcgaccactggaaagagg
tgccccgagtgtgactcaacaataattgaggttgacttcaacaagaagagcacacccctc
aaagatggagctactttgcatgtcggttgtatcttgtgtgatgatttattgcactcccta
gtggaaatgaagcatggcaggtccttttttaggcgtggaagaggaagaggccgaggtcga
ggaagaggaaggagcaggggtaggggaaggagtggtctaaagaacgaggacccaaagatg
agttttcgagatttttaa

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