Typha angustifolia (narrow-leaf cattail): 140768901
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Entry
140768901 CDS
T11061
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00040
Pentose and glucuronate interconversions
tang01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140768901
Enzymes [BR:
tang01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140768901
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Gene cluster
GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
WH_CYT4
DUF3293
Motif
Other DBs
NCBI-GeneID:
140768901
NCBI-ProteinID:
XP_072965464
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All DBs
Position
10:complement(join(12390345..12390566,12390660..12390798,12390939..12391042,12391138..12391795,12392029..12392234))
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AA seq
442 aa
AA seq
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MEGLQLNKPSCFFLFSVLCLASAALSNAHIAEFDDHWEKKAEIAKALARAAYNPDPESVT
DHINRAVHKALEKNSTRRSLRRRHRYTGPCLATNPIDRCWRCRKNWMNHRKRLANCVKGF
GHQTDGGKDGKFYIVTDPSDNDLVNPKYGTLRYGVIQDEPLWIVFARDMNIRLSEELIVN
SNKTIDGRGANVHIAWGAGITIQFVQNVIIHNLHIHDIMSGSGGMIRDTPTHYGLRSRSD
GDGISIYGASKVWIDHVSMSRCQDGIIDAIAGSTAITISNSHFTHHNDVMLFGASDSHSE
DRIMQITVAFNHFGRSLVQRIPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRYT
APPQLFAKQVTKRDYATEEEWKHWTWRSDGDLMRNGAFFVESGVPSTRAFSRNQIIKAKP
GTYAGRLTRFSGALKCLRGRKC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccttcagctaaacaaaccaagctgcttctttctcttctccgtcctctgcctg
gcctccgccgccttgtcgaacgcccacatcgcggaattcgatgatcactgggaaaagaag
gcagagattgccaaagccctggcgcgcgccgcctacaaccctgaccctgagtcagtcacg
gaccacatcaacagagccgtccacaaagccctggagaagaacagcactcggcgaagcctc
cgcaggcgccaccgctacaccggcccatgcttggcgacgaatcccatcgaccggtgctgg
cggtgccgcaagaactggatgaaccaccgcaagcgtctcgccaactgcgtcaagggcttc
ggccaccagacagatggcggtaaggacggcaagttctacatcgtcactgatccctccgac
aatgacctcgtcaaccctaagtatggcaccctccgctacggcgtgatccaggatgagccc
ctctggatcgtcttcgcccgtgacatgaatatccggctctccgaggagctcatcgtcaac
agcaacaagaccatcgacggccgtggggccaatgtccacatcgcctggggcgctggcata
accatccagttcgtccagaatgtcatcatccacaacctccacatccacgacatcatgagc
ggcagcggcggcatgatcagggacacaccgacccactacggactccggagcaggagcgac
ggcgacggcatctccatctacggcgcaagcaaggtgtggatagaccacgtctccatgtcc
aggtgccaggatggaatcatcgacgccatcgccggatccaccgccattaccatctccaat
agccacttcacccaccataacgacgtgatgctgtttggggccagcgattcccactcggaa
gaccgaatcatgcagataacggttgcattcaaccacttcgggcgatccctggtgcagagg
attccaaggtgccgatggggattcttccatgtggtgaacaatgactacacccattggcta
atgtacgccatcggcggtagccaacaccccaccatcatcagccaaggcaatcgttacact
gcccctccacaactctttgccaaacaggtgaccaagagggactatgcaacggaggaggag
tggaagcactggacgtggcggtcggacggtgacctgatgcggaacggagccttcttcgtc
gagtcaggagtcccgagcacgagggcgttctcgcggaatcaaatcatcaaggctaagccc
gggacgtacgccggcaggctcacccgcttctccggagcgctcaaatgtctgcgtggcagg
aaatgctga
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