Typha angustifolia (narrow-leaf cattail): 140769015
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Entry
140769015 CDS
T11061
Name
(RefSeq) zinc finger protein MAGPIE-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tang03000
]
140769015
Transcription factors [BR:
tang03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
140769015
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_jaz
zf-met
Motif
Other DBs
NCBI-GeneID:
140769015
NCBI-ProteinID:
XP_072965622
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Position
10:complement(join(10231143..10231983,10232091..10232487,10232574..10232673))
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AA seq
445 aa
AA seq
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MAGEAISKAFSLKPDQDLNPPPAKKKRNLPGTPDPDAEVIALSPKTLMATNRFLCEICGK
GFQRDQNLQLHRRGHNLPWKLRQRSTKEPRKRVYVCPEKTCIHHNPLRALGDLTGIKKHF
CRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDAL
AEEAARVSAVSNQGNNTAAGNINYLFTGGLMRSNMLQNLPSNMKPNMANNNVEGIGQCRD
ELSLWMGHGSQSNEHLSNASMHHIGSMGGAATLHGDLFASNSYAQQIDQNQLSWLYSSKL
PCSSNNGELTSTMKEATDGSQSLLASVPSLFSNQHQDRPPPMSDMSATALLQKAAQIGVT
STTPFEEHNKFDGLLSSSHPSSLENIMNEFMVANSYDMYSATRRHGSSKDDLGGGGGGGG
GGGETRDFLGVGVQTLCPSSINGWI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgaagcgatctccaaggccttctctctaaaaccagaccaagatctcaaccct
cctcctgcaaagaagaagcgaaacctaccaggaactccagaccctgatgctgaagtgata
gccttgtctccaaagaccctcatggccaccaaccgcttcctctgcgagatctgcggcaaa
ggcttccaaagagaccaaaaccttcaattgcaccggcgaggccacaacctcccatggaag
ctaaggcagaggagcaccaaggagccgaggaagagggtctacgtctgccctgagaagacc
tgcatccatcacaaccccttgcgagctctcggggacctcaccggcatcaagaagcacttc
tgccgcaagcacggcgagaagaaatggaagtgcgacaagtgctcgaagcgctacgccgtg
cagtccgactggaaggcccactccaagacctgtggcacgagggagtaccgctgcgactgc
ggcaccctcttctccagaagagatagtttcattactcatagggccttctgcgacgcgcta
gcagaagaggcggcgagggtatctgcggtgtctaaccaaggcaataacaccgcggccggc
aacatcaattatctcttcaccggaggattgatgagatctaacatgctgcagaatttgcca
tccaacatgaagccaaacatggctaacaataatgttgaaggtatcggtcagtgtagagat
gagctctcattatggatgggccatgggagtcagagtaacgagcatttatccaacgctagt
atgcaccacattggatccatgggaggagctgcaactttgcatggtgatctattcgcttcg
aattcatacgcacaacaaattgatcagaaccagttgagttggttgtacagcagcaagttg
ccatgttccagtaataacggagagctaacaagcacgatgaaggaagccacggacggctcg
cagtctcttcttgcgagcgtcccttcgctgtttagtaaccaacaccaggaccgaccgccg
ccgatgtcggatatgtctgcgacggcgctattgcagaaggcggcacaaatcggtgtgact
tccaccactccatttgaagaacataacaagttcgatggtttgctcagttcgagtcatcca
agtagtctagagaacatcatgaatgagttcatggtcgcgaattcgtatgacatgtactca
gcgacgcggcgccatggctcatcgaaggatgacttgggaggaggaggaggaggaggaggt
ggtggaggagagaccagggacttcttaggtgttggggtgcaaactctttgcccctcatcc
atcaacggatggatttga
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