KEGG   Typha angustifolia (narrow-leaf cattail): 140769027
Entry
140769027         CDS       T11061                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140769027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tang03041]
    140769027
   03400 DNA repair and recombination proteins [BR:tang03400]
    140769027
Spliceosome [BR:tang03041]
 Complex B
  Other components
   Prp19 complex
    140769027
 Complex C
   Prp19-CDC5 complex
    140769027
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    140769027
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 140769027
NCBI-ProteinID: XP_072965645
LinkDB
Position
2:complement(join(9845811..9846824,9847186..9847467,9848352..9850079,9850810..9850986))
AA seq 1066 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEPSDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGINTRHRKRKRRGIDYNAEIPFEKRPPPGFYDVTGEDRPTEQPKFPT
TIEELEGKRRVDVEAQLRKQDIGRNKIAQRQDAPSAILQANKLNDPEAVRKRSKLMLPAP
QISDHELEKIAKMGYASDLVLSAEELAEGSGATRTLLANYSQTPRLGMTPLRTPQRTPSG
KGDAIMMEAENLARLRESQTPLLGGENPDLHPSDFSGVTPRKREIQTPNPMATPMASPGP
MGLTPRIGMTPSVDGPSFGATPRATPFRDELHINEEMDMQDNAKLELRRQAELRRNLHSG
LTKLPQPKNDYQIVIHPIPEEHEEAEEKIEEDMSDLIARERAEEQARQEALLRKRSKVLQ
RDLPRPPATSIELIRNSLIKGGEGRSSFVPPTLFEQADEMINKEFLALLEHDNAKYPLDE
KTEKEKKKGIKRMANGKSSVSVPEIEDFEEDELKEADSMIKEEIQFLRVAMGHEQESLED
FVKARDACQDDLMFFPTNNSYGLASVAVNTDKLVALQNEFENVRKRMDDEAKKATRLEQK
IKVLTHGYQTRAGKLWSQIEATFKQMDTAATELECFQLLQKQEILAAAYRVNNLVEEVDK
QKALEKSLQHRYGDLLADYERIQVLLEEHKRQLKIQEEIAAKNRATEEVAAKNHAIEEEI
AAKSSMEEEVTAKNLANDGQITAESNNLDGQSAVMKQHFDEISTCDSERIQPVLIENEDA
VQAQITHTTDMIPEGINDLKEHIPPAFDSQAHGSKVVAGFVDNPHGDVLLLDVPPEGSLQ
PVDGSDSSVLIVGASNNQKADPHIVGLDSNVASDIQMMDAETHKQSDVPKEEGYPVKSGN
SDARTDEQGVDDSSVASSLTEESKGENYGNSADASLPVADQNGLNG
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgaggattatgataaagggaggtgtgtggaagaacacggaggatgagatcctcaaggcg
gcggtgatgaagtatggcaagaatcagtgggctcggatctcttcgctactagttcgtaag
tccgccaaacagtgcaaggctcgttggtacgagtggctcgatccttccatcaagaagacc
gagtggactagggaagaagatgaaaagttactgcatcttgctaaacttatgcctacacag
tggagaacaattgcaccaattgtaggccgaacaccttctcagtgccttgaacgctatgag
aaactacttgatgctgcttgtgcgaaagatgagaattatgagcctagtgatgacccgagg
aagttgcgcccgggagagattgacccaaaccctgagtccaagcctgcacgtcctgatcct
gtcgatatggatgaagatgaaaaggaaatgctctcagaagcaagagctcgattagctaac
actaggggaaagaaggccaaacgcaaagcaagagagaagcagcttgaagaggcaaggcgg
cttgcatctttgcaaaagagaagagaattgaaggctgccggtataaacacaaggcaccgg
aagaggaaaagaagaggaattgattataatgcagaaataccatttgaaaagagaccgcct
ccaggattctacgacgtgacaggtgaggatcgacccacagaacagccgaagttccccacc
actattgaggaactagaaggaaaaaggagggttgatgtagaagcccaattaaggaagcaa
gacattggtaggaataaaattgcacaacgacaggatgctccttctgcgatattgcaggca
aacaagcttaatgacccagaggcagtgaggaagaggtcaaaattaatgcttccagcgccc
cagatttcagatcatgagttggagaagatagcaaagatgggttatgcaagtgatcttgtt
ctgtccgcagaggaacttgctgaaggaagtggtgccactcggactcttcttgctaactat
tctcagacaccaagactaggcatgacacctttgcgcaccccacagagaactccgtctggc
aaaggtgatgctattatgatggaggctgagaaccttgcacgtctgagagagtcacagacc
cctcttctaggaggggaaaaccctgatcttcatccatcagatttctcaggtgttacccca
aggaaaagggagatacaaactcccaatccgatggcaactcctatggcaagtcctggacct
atgggtctcacccctaggattgggatgactccctcagtagatgggccttcttttggtgca
acccccagagcgactccatttcgtgatgagcttcacataaatgaggagatggatatgcag
gataatgccaagcttgaacttcgcagacaggctgaactgagaaggaacttgcattctgga
ttaacaaaactcccacagcctaaaaacgattatcaaatagttatacacccaattcctgag
gagcacgaagaagctgaggagaagattgaagaagatatgtcagacttgatagcaagggag
agggctgaggaacaagcaaggcaggaagccttgcttagaaagagatccaaagtgctgcag
agagaccttcctagacctcctgctacttctatagagcttataaggaattccctcatcaag
ggtggtgaaggaagaagttcttttgtcccccctaccttgtttgagcaggctgatgaaatg
ataaacaaggagtttcttgcactgctggagcatgataatgctaaatacccgcttgatgag
aaaacagagaaggagaaaaagaaaggaatcaagcgtatggcaaatgggaaatcttctgtt
tctgtacctgaaattgaagattttgaggaggatgaactgaaagaggctgattctatgatt
aaggaagagattcagttccttcgtgtggcgatgggtcatgaacaagaatctcttgaagat
tttgtgaaagcgcgcgatgcatgccaggatgacctcatgtttttcccaactaataatagt
tatggtcttgctagtgttgctgtaaatactgataaacttgtggctctacaaaatgaattc
gagaatgtgagaaagagaatggatgatgaagcaaagaaggctacacgacttgaacagaag
atcaaagtcctcacacacggatatcaaacaagggctggaaaattatggtcacagattgag
gccacatttaagcaaatggacactgctgcaacagaacttgaatgctttcagcttctacaa
aagcaggaaatattggctgctgcatatagagtcaataatttggttgaagaagttgataaa
caaaaagctttagaaaaaagtctccagcaccgctatggagatcttctggctgattatgag
agaatccaagtgctgctggaggagcataaaagacaattgaaaatacaggaagaaattgca
gcgaaaaatcgcgctactgaggaagttgctgctaaaaatcatgctattgaggaagaaata
gcagctaagagttctatggaggaagaagtcacagcaaaaaatcttgccaatgatgggcaa
ataactgctgaaagcaataatttggatggacaatcagcagttatgaaacagcactttgac
gaaatcagtacttgtgattcagaacgtattcagccagtactaattgaaaatgaagatgct
gttcaagctcaaattactcatacgactgatatgattccagagggtatcaatgatcttaag
gagcatattcctcctgcctttgactctcaggcacatggatcaaaagttgtagctgggttt
gtggataacccacatggtgatgttttattgttggatgttccacctgaaggttccctgcaa
ccagtagacggatctgactcgagtgttcttattgttggtgcttcaaacaaccagaaagct
gatccacatatagtgggtttagacagcaatgtagcttctgacattcaaatgatggatgct
gagacgcataagcagtcagatgtgcctaaggaagaaggttatcctgtcaaatctggaaat
tctgatgccaggacagatgagcagggagtggatgattcaagtgttgcttccagcttaact
gaagaaagtaagggagaaaactatggcaactctgctgatgcttctttaccagttgctgat
cagaatggcctaaatggttaa

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