Typha angustifolia (narrow-leaf cattail): 140769109
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Entry
140769109 CDS
T11061
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140769109
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140769109
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140769109
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
140769109
NCBI-ProteinID:
XP_072965772
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All DBs
Position
10:complement(join(4914864..4914944,4915150..4915206,4915332..4915518,4915635..4915762,4915842..4915947,4916378..4916457,4921392..4921489,4921573..4921686,4921776..4921916,4921980..4922064,4940248..4940520))
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AA seq
449 aa
AA seq
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MGGRSSREASGRNRSFQERSYPAEQSWGRTYSYETPGYQNYAPPPPPPEGFSTPYPAYPP
PPAQPQNSADSRPRLDRWYSRISDQYSSVEQVTEALAHAGLESSNLIVGIDFTKSNEWTG
KHSFSGRSLHYIGDTPNPYEQAISIIGRTLSKFDEDNLIPCFGFGDASTHDQDIFSFYPD
ERPCNGFAQALARYRELVPHLRLAGPTSFAPIIEMAMTIVAQSGGQYHVLLIIADGQVTR
SVDTEFGQLSSQEQRTVDAIVKASELPLSIVLVGVGDGPWDTMKEFDDNIPARSFDNFQF
VNFTDIMSKNMSQSRKEAAFALAALMEIPAQYKATLELGILGRYSAKSPDRVPLPPPSGN
SDAYSFDSKSSKSSSFEQSTSHYDGYDTTPSTAPSAPSASWDNQVCPICLVNPKDMAFGC
GHQTCCDCGPSLQSCPICRSQIQTRIKLY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggagggcgtagttctagagaagctagcggccggaataggtcattccaggagcggagt
tatccagcggagcaatcctggggtcggacttattcgtacgagacgccagggtatcagaat
tatgccccgccgccgccgccccccgagggattttctacgccttatccagcttatcccccg
ccgcctgctcagccacagaatagtgctgattcacggcctagattggatcggtggtattcg
aggataagcgaccagtacagttccgtggaacaggttactgaggcccttgcacatgctggc
ttggaatcttcaaatcttattgttggcattgatttcacgaaaagcaacgaatggacaggt
aaacattcatttagcggacgcagcttacattacattggcgatacaccaaatccctatgaa
caagcaatctcaattattggacgaacattatcaaagtttgatgaggataacttgattcca
tgctttggatttggagatgcatcaacacatgatcaggacatctttagtttctatccagat
gagagaccctgcaatgggtttgcacaggctctggcacgatatagagaacttgttccacat
ttgcgattggcaggaccaacttcatttgctcccattattgaaatggctatgacaattgtg
gcgcagagtggtggacagtaccacgttttattgataattgctgatggtcaggtcactagg
agtgtagatactgaatttggacaattaagctcacaggaacagaggactgttgatgctatt
gtgaaagccagtgaacttcctttgtccattgtcttggttggcgtcggggatggcccttgg
gacacaatgaaggaatttgatgataacattcctgcccgatcttttgataatttccagttt
gtgaattttacagatataatgtctaagaacatgtcacaatcaagaaaagaggctgcattt
gctcttgcagctttaatggaaatacctgcacagtataaagcaacacttgaattgggaatc
ttaggtcgttattctgcaaagtctccagatagggtacctctcccgccacctagtggaaat
agtgacgcttattcctttgattccaaaagctctaagtcaagcagtttcgagcagagtaca
tcacattacgatggatatgatactacaccaagtacagctccttctgcacctagtgcttca
tgggataatcaggtttgcccaatttgccttgtgaacccgaaagacatggcttttggttgt
ggacaccagacttgctgtgactgtgggccaagccttcagtcatgcccgatctgtcgtagt
caaattcagacaagaataaagctatactga
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