KEGG   Typha angustifolia (narrow-leaf cattail): 140769116
Entry
140769116         CDS       T11061                                 
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like isoform X1
  KO
K19045  E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:2.3.2.27]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tang04121]
    140769116
Enzymes [BR:tang01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     140769116
Ubiquitin system [BR:tang04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    140769116
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-RING_5 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_16 zf-ANAPC11 RINGv zf-C3HC4_4 Prok-RING_4 zf-RING-like zinc_ribbon_16 zf-Nse zf_RING_Vps8 zf-C3H2C3 zf-RING_Vps41 zf_RING_Vps8_fungal
Other DBs
NCBI-GeneID: 140769116
NCBI-ProteinID: XP_072965784
LinkDB
Position
2:complement(join(6483781..6483822,6484711..6484819,6485218..6485342,6486043..6486087,6486190..6486254,6489098..6489296,6490944..6491090))
AA seq 243 aa
MAIRSGERGKQQNGMHYVNSSTPNVVVESFEGLDLYFDDLALGEVLQDQEIVHQSLMGNS
HSGDHRSNRDNGQSSNGVNSSRAAPPTWCASDEALARQLQELENMHIDTSPNDFLHIASV
ESSQPVSESNSTNNYSEVTEEDNIEPDNMTYEQLQSLGEEIGTESRGLSDEIISYLHTSK
YNPDFSSGEENHEECVICLSAFRKGEKLINLPCEHYYHAACITRWFKDKKTCPVCKYEVF
GPS
NT seq 732 nt   +upstreamnt  +downstreamnt
atggcaattagatctggagaaaggggaaagcagcaaaacggcatgcactatgtaaactct
tctactccaaacgtggtggtagaaagctttgaaggacttgacctttactttgatgatctt
gcacttggtgaggttctccaagatcaggaaattgttcatcagtcactgatggggaattct
cacagtggggatcaccgatccaatcgtgataatggccaaagtagcaatggcgtgaattcc
tcaagagcagcacctcctacatggtgtgcatctgatgaagctttagctaggcagttgcaa
gagttggagaatatgcatattgatacttctccaaatgatttccttcatatagcatccgtc
gaatcttcccaaccagttagtgaatccaactctaccaacaattactcagaggtgacagag
gaagacaacattgaaccggataatatgacatatgagcaattgcaatcattaggagaagaa
attggaactgaaagcagaggtttatctgatgagattatctcctatttgcatacttcaaag
tacaatccagacttctcatcaggggaagagaatcatgaagaatgtgtcatctgcctatca
gctttcagaaaaggagaaaagttgattaatttgccatgtgagcattattatcatgcagct
tgtataactcggtggttcaaggataagaagacatgcccggtgtgcaaatatgaggtattc
gggcctagctag

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