KEGG   Typha angustifolia (narrow-leaf cattail): 140769220
Entry
140769220         CDS       T11061                                 
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial-like
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tang03016]
    140769220
Enzymes [BR:tang01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     140769220
Transfer RNA biogenesis [BR:tang03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    140769220
 Prokaryotic type
    140769220
SSDB
Motif
Pfam: Lactamase_B_4 Anti-Pycsar_Apyc1 Lactamase_B_2 TVHS-like Lactamase_B
Other DBs
NCBI-GeneID: 140769220
NCBI-ProteinID: XP_072965957
LinkDB
Position
10:complement(join(10501023..10501064,10501698..10502615,10503055..10503210,10503617..10504372,10505898..10506185,10506788..10507451,10507545..10508053,10509160..10509237,10509330..10509477,10510013..10510281,10510571..10511080,10511214..10511257,10511488..10511542,10511834..10511878,10512047..10512136,10512965..10513372))
AA seq 1659 aa
MSKVSNLRLLLPSSSSLFLSKKPFLLSPFSHSLFSKPSLPRKTYFAPITALSYAGRHRRR
GRGGGGGVSPQRRGNSTLREGGERDKERGRMVDMEEGEDLSFNKRRAEGRDRSGKGKALQ
LKTRKLNPVNTICYLQILGTGMDTQDTSPSILLFFDKQRFIFNAGEGLQRFCTEHKIKLS
KIDHIFLTRVCSETAGGLPGLVLTLAGIGEEGMSVNIWGPSDIDFLVEAMRSFIPKKAML
HTHSFGLNQNNGRGSSPTSGNGKSIDPVVLVDDEVVRISAFFVKPGYSKSFINNLKAPNL
DLLDGENYSSQYAYPKAQSSESLHSETEFNLKPGDTAVVYACELPEIKGKFDPVKAASLG
LKPGPKYRELQLGNSVLSDRLNIMVNPSDVLGPSSPGPIVLLVDCPTMSHMHELLSLQSL
SCYYANSSTHSTEGVKIVNCIIHLGPSSVTKSIEYQNWMRRFGNAQHIMAGHEIKNTKIP
ILKASARISSRLNYVCPQLFPAPGLQSAEQINNLPLEKSVNAEGTSLTLCKSTSAENLLK
STSAENLLKFNLRPHSLLGLDKSAIPGTLSHKEIVEELFSEIPEIKDISKQISQFWGSPL
QNNSMVPLEDDNIIMVEEPWINESSLVPIEHMQKKRLDVSEDGSPYLAAHLIKGLEENLD
IPSCLENITREDMEVILLGTGSSQPSKYRNVSSVFVNLFARGSLLLDCGEGTLAQLKRRF
GVKGADNAVTSLRCIWISHIHADHHTGLVRILALRCQLLKGVPHKPLLVIGPRPLERFLK
AYSELEDLDMQFLDCRHTLKTTVESLLSNHGSGRGDSADSNYESNRGAGLATVTSHQLES
TLFAPGSRMESYRKKPGIPVEASMALISLREVLFEAGLEFLHSVPVLHCPEAFGVALKSR
EKVNSRGKTIPGWKLVYSGDTRPCPALIDASNDATVLIHEATFEDSMKDEAINRNHSTTK
EAIGVGTSAGAYRIILTHFSQRYPKIPVFDETDMHKTCIAFDLMSVNLADLPVLPNVLPY
LKVLFRNEMMADESDDALRLIKYAVGKSGNEFRREMQRHSVAIRQLCHYKGQPDPLKGDS
LNKAVRETAQEAVSTVFSSDDSKPTAPAEGLNKRIQGFGNTNFETLSEDKKSFISEVVGL
GSASIKQGLSNFAAAHSMMKNDNGTYKSPTLRRSLTTENNRHDKYEANGNHSETWVSSGV
SKNVASGTWGADSRTSITGPAPTEYSRSSNSGVKSREERLLETIVTCGGVRLQPTRDALQ
VFLSEVSKLDPLAMSSALEVKLQSPIWQVRMKAICVLESILRKKDDESFSCIASYFSENR
ESVVKCSELPQVSLRDKATKVLNLLDGEQSAQTRNVMEHSHAKAVSEPVVQMPDLIDTGD
LDNNGGDIFSQKHHDQSISNLTEENSSVDDLLGGNPISELSTGGNRDGSDPFADVSFHVA
EDKEPNDLFSGLTLDDKSSNVKHDMPSTSNPELLDIFGGNSEHLYQETVTDKRHNQLLAD
LTLTGMAQGQPRMVGESGGILTGFSDQNSQPSEVPNSGASNIIFGPNSFFPEVPMQYNMP
PSIMLNEGYAAQPLNYGSMGNLIAQQQLLYQNLGNFNPGFGHEVAKDGYPSALPDIFQLS
HNPVQKHGSMMTNMKKEETKAFDFVSDHLAAVRGSKRVI
NT seq 4980 nt   +upstreamnt  +downstreamnt
atgtccaaagtctccaacttgagacttctcctcccctcctcgtcgtcgctcttcctctcc
aagaaacccttcctcctctcccccttctcccactccctcttctccaagccatcactgccc
cgaaagacatacttcgccccaatcaccgcgctatcctacgccggtaggcaccgaagaaga
ggccgcggcggtggcggtggcgtttcgccgcagaggagaggcaacagcactctaagggag
ggaggagagagggataaagagagggggagaatggtggatatggaagaaggagaagatttg
tcgtttaataagaggagggcggaggggagagatcggagcgggaaggggaaggctctccag
ctcaagacccggaagttgaatcccgtcaatactatatgctaccttcagatactgggaact
gggatggacacacaagatacttcgccttctattttgctcttctttgataaacagagattt
atatttaatgctggcgaggggttgcagaggttctgcacggagcataagataaagctatca
aagattgaccacatatttttgactcgcgtatgctcagaaactgcaggtggacttccaggc
cttgtgcttactctggcaggaataggagaggaagggatgtcggtcaatatatggggtcca
tcagatattgactttttagttgaggcaatgagatcttttatcccaaaaaaggccatgctt
cacacacacagctttgggttgaatcagaataatggcagagggtcatctccaacttctgga
aatggcaaatctatagatcccgttgttctagttgatgatgaagtggttcgtatatcagct
ttctttgtaaagccaggatactccaaaagtttcataaataatttaaaagctccaaattta
gatttgttggatggagaaaactattcgagtcagtatgcataccctaaagctcaatcctct
gaaagtttgcacagcgaaacagaatttaacctaaagcctggtgacactgctgttgtgtat
gcctgtgaattacctgagataaaaggaaagtttgacccagttaaagctgcatctcttggt
ctgaagcctggaccaaagtaccgtgaactgcaacttggaaactctgtcttgtcagatcgt
ctcaacattatggttaatccaagtgatgttcttggtccttcatctcctggccccattgta
cttctggtggactgccctacaatgtctcatatgcacgaactgctttctctgcaatccctc
agctgttactatgcaaattcttctacacattcaacagagggtgttaaaatagtaaattgc
ataatccacctgggtccatcttctgtcacaaagagtatcgagtatcagaactggatgaga
agatttggcaatgcacaacacatcatggcgggacatgaaataaaaaatacaaagattccg
atcttgaaggccagtgcaagaatatcatcgcggctcaattatgtatgccctcagctattt
ccagcccccggtttgcagtctgctgaacagattaataacttacctttggagaaaagtgta
aatgctgagggtacttctttaaccctttgcaaaagcacatcagcagaaaatcttctcaaa
agcacttcagcagaaaatcttctcaagtttaatttgcggccgcactctcttctgggactg
gataaatctgccatcccaggcacacttagtcacaaggaaattgttgaggagcttttttca
gaaatcccagaaataaaagatatttccaagcagattagtcagttctggggaagtcctctg
caaaataattctatggtgcctctagaggatgacaacataataatggtggaagaaccttgg
ataaatgaaagttccttagttcctattgaacacatgcaaaagaaaagattggatgtatct
gaagatggatctccttatctagctgctcatttgataaaggggcttgaggaaaatcttgac
atcccttcttgcttggagaacataacaagagaagatatggaagtcattcttttgggaaca
ggttcatctcagccttcgaaatatcgaaatgtcagctctgtgtttgttaatttatttgct
cggggcagtttactccttgattgtggtgaaggaactctagcacaacttaaaaggaggttt
ggtgtaaagggtgctgacaatgctgtcacaagcttaagatgtatttggatttcccacatt
catgctgatcatcacacaggtctagttagaatacttgcgttaagatgccagttgttaaaa
ggtgtacctcataaacctttacttgttattgggccaagaccactcgagaggtttcttaaa
gcatattcagaactagaagatctcgatatgcagttcttagattgcaggcacaccctgaag
actacagttgagtctttactcagtaaccatggttcaggaagaggtgactctgcagattca
aattacgagagtaacagaggtgcaggactggcaactgttacatctcatcaactggaaagt
actttgtttgctcctggcagtagaatggagagttacaggaagaaacctgggattccagtt
gaagcttccatggctttaattagtttaagagaagtgctatttgaagcaggtttggaattt
ttacatagtgtccctgttttacactgcccagaggcatttggtgttgccttaaagtctaga
gagaaagtgaatagtcgtggaaaaactattcctggctggaagctcgtttattcaggtgac
actcggccatgcccggcccttattgatgcatctaatgatgccacggttcttattcatgag
gcaacatttgaggatagcatgaaggacgaggcgattaataggaatcacagcaccacaaag
gaagccattggagtgggtacatcggctggtgcgtatcgcattatccttactcacttcagt
cagagatacccgaagattccagtttttgatgagaccgacatgcacaagacatgcattgca
tttgacttgatgagcgtcaacttagcagacttgcctgtgcttcctaatgtcctaccttac
ctcaaagttctcttcagaaatgaaatgatggccgatgaatccgatgatgctttacggctt
atcaagtatgcggtgggaaaatctggcaatgagttcaggagagaaatgcaacgacattct
gttgctatccgtcagctttgtcattacaagggtcagcctgatcccctgaaaggggattcc
cttaataaggctgttcgtgaaactgctcaagaggccgtgtctactgttttttcttctgat
gacagtaagccgacagccccagctgaaggtctgaacaagcgtatccaaggatttggtaat
accaattttgagacgctgagtgaagataaaaagtcttttataagtgaagttgtcggtctt
ggtagtgcctcaatcaagcaggggcttagcaattttgctgctgcacattcaatgatgaaa
aatgataatggtacctacaagagcccgactctccgaaggtctctaaccactgaaaataat
agacatgataagtatgaagcaaatgggaaccatagtgagacttgggtatcttctggtgtc
tcaaagaatgtagcttctggtacatggggtgcagactcaagaacgagtataactggacca
gcaccaactgaatatagcaggtcaagtaattcaggggttaagagtcgtgaggagaggctt
ttggagaccattgtcacttgtgggggtgtccggctgcagccaactcgtgatgctctacaa
gtgttcctatctgaggtctcaaagctggatcctctggctatgagttctgcccttgaggtt
aaacttcagtcacctatatggcaggttcggatgaaggccatctgtgtgttggaatcaatt
ctgaggaaaaaggatgatgaaagtttttcttgtatagcatcttattttagtgaaaacagg
gaatccgtggttaagtgctctgaattgccccaagtttctttaagggataaagctaccaag
gtcttaaatcttttggatggagagcagtctgcccaaacaagaaatgtgatggagcattca
catgcaaaagctgtgtcagagcctgttgttcagatgcctgacttaattgatacaggcgac
ctagataacaatggaggtgacattttcagtcagaagcatcatgatcagagcatttctaat
ctaactgaagaaaactcttcagttgatgatctcttaggtggtaaccctatttctgagctt
agcaccggagggaatagagatgggagtgatccatttgcagatgtgtcattccatgtggcg
gaggacaaggagcccaatgaccttttctcaggcctgactttagatgataagtcatcaaac
gtaaagcacgatatgccttcaactagtaatcctgaattacttgatatttttggtggcaac
tcagagcacctatatcaagaaacagtaacagataaaaggcataatcagttgctggctgat
ttgactctcactggaatggctcaaggccaacccagaatggttggagaatctggtggtatc
ctcacaggattctcagatcaaaacagtcaacccagcgaggtaccaaacagtggagcatca
aatattatttttggtccaaattctttttttcctgaggttcctatgcagtacaacatgcct
ccaagtattatgctcaatgaaggttatgctgcccagccattgaattatggttcaatgggg
aatctcattgctcaacagcagttgctatatcaaaacctcggaaatttcaaccctggattt
ggacatgaagttgcaaaggatggttacccttcagccctcccggatattttccaactgtct
cataatccagtccaaaagcatggttcgatgatgaccaacatgaaaaaggaggagactaaa
gcttttgattttgtatcggatcaccttgcagcagtccgtggttcaaaaagagtaatttga

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