Typha angustifolia (narrow-leaf cattail): 140769425
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Entry
140769425 CDS
T11061
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140769425
Spliceosome [BR:
tang03041
]
Common components
Common spliceosomal components
General mRNP proteins
140769425
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
140769425
NCBI-ProteinID:
XP_072966226
LinkDB
All DBs
Position
2:complement(join(7459303..7459344,7459423..7459537,7459856..7459944,7460038..7460272,7460500..7460558,7461813..7461896,7461993..7462067,7462139..7462225,7463271..7463493,7465155..7465210,7466395..7466451,7466540..7466621,7466978..7467450))
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AA seq
558 aa
AA seq
DB search
MDFDEYEYLEKAVENPEPMKGKGSANGVTSEEKKPNRSSRKRSDEAGRDTDRQLKRSRSE
DGSGRDRDRHRERGKERERDRDKSSREHKEREERNGKEREREVDRDANRERERERDRDKG
RKNQLERHQEVERERYNDRSKEREFKERDFRERDRGPRRPKDRKEDGTELEADPERDQRT
VFAFQICLKADERDVYEFFSRAGKVRDVRLITDRNSRRSKGFGYVEFYDSMSVPMAIALS
GQLLLGQPVMVKPSEAEKNLAQSTTTAGAGGSTGTGGARKLYVGNLHLNITEVQLRQVFE
SFGIVELVQLPLDPQTGLCKGFGFVQFARLEDAVAAQSINGQLDIAGRTIKVSAVTDQVG
MQDAGGNAGDLDDDEGGGLSLNARSRALLMQKLDRSGTSIAGAIVTHAASDAGTAPTASV
FGHPAVANPVVQPTLPALVGFPGLTHPVTPAAQPVLEAVGIPSECLLLKNMFDPSAETEP
AFELDIEEDVQEECSKFGTVKHIYVDKNSAGHVYLRFDSINSSTNAQQALHGRWFAGKMI
TATYMLPQNYEAKFPDSS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgagtacctggagaaggcggtggagaacccagagccgatgaag
gggaaggggtcggccaatggcgtgacttcggaggagaagaagcctaaccggagctccagg
aagcgctccgacgaggctgggcgcgataccgatcgacaactcaagcggtcgagatcggag
gatggtagcggccgggaccgtgacaggcatcgggagagaggtaaagaacgggaaagggat
cgcgataaaagcagtagggagcataaggaaagggaggagaggaatgggaaggaaagagaa
agagaggtggacagggatgcgaatcgagagcgtgagcgtgagcgagatagggacaagggg
agaaaaaaccagttggagaggcaccaggaagtggagcgagagaggtacaatgataggagc
aaagagagggagttcaaagaaagagattttagagagagagatcgaggtcccagacgtcct
aaagatagaaaggaggatggaacagaacttgaggctgatccagagagggatcaaagaact
gtatttgcctttcagatctgtttgaaggcagatgaaagagatgtgtatgagttcttttcc
cgagctggaaaggtgagggatgtccgcctcataacagatcgcaattcaagacgttctaag
ggatttggttatgttgagttttatgactccatgtcagtcccaatggcgatagctctatca
ggccagctgcttctaggccaaccagtaatggttaagccctcagaggctgagaagaactta
gcgcagtcaactacaactgctggagctggtgggtccactgggactggtggagctagaaag
ctctacgtaggcaatcttcacttaaacattactgaagttcaactacgtcaggtttttgaa
tcatttggcatagtagagcttgttcagttgccccttgatccgcagactggactctgcaaa
ggtttcgggtttgttcaatttgcgcgccttgaagatgcagtagctgctcaaagtataaat
gggcaactcgacattgccggcaggacaatcaaggtttctgcagtcacagatcaagttgga
atgcaagatgctggtggaaatgctggtgatttggatgatgatgagggtggaggcttgtca
ttaaatgctcgttctagagctcttctcatgcagaaactggaccgcagtggcaccagtatt
gctggtgcaatagtcacacatgcagccagcgatgcaggcactgcaccaactgcatcagtt
tttggtcatcctgcggtggctaatcctgttgtacagcccactctacctgcgcttgttggc
tttccaggtcttactcatccagtcactccagcagcacaaccagtcttagaagctgttggt
attcccagtgaatgtttgctgcttaagaatatgtttgatccgagtgcggagactgaacca
gcttttgagttggatattgaggaagatgttcaagaggagtgttcaaaatttggcactgta
aagcatatctatgtggacaaaaatagtgctggccatgtgtacttgaggttcgacagtata
aattcatctactaatgctcagcaagcactccatggaaggtggtttgctggaaagatgatc
acagcaacgtacatgcttccccagaactatgaagcaaagttcccagatagcagctga
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