KEGG   Typha angustifolia (narrow-leaf cattail): 140769524
Entry
140769524         CDS       T11061                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03082  ATP-dependent chromatin remodeling
tang03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    140769524
   03083 Polycomb repressive complex
    140769524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tang03036]
    140769524
Enzymes [BR:tang01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     140769524
Chromosome and associated proteins [BR:tang03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     140769524
   HDAC complexes
    Sin3A-HDAC complex
     140769524
    BRAF-HDAC complex
     140769524
    REST complex
     140769524
    SHIP complex
     140769524
    MiDAC complex
     140769524
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     140769524
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    140769524
  Chromatin remodeling factors
   NuRD complex
    140769524
SSDB
Motif
Pfam: Hist_deacetyl DUF7505
Other DBs
NCBI-GeneID: 140769524
NCBI-ProteinID: XP_072966341
LinkDB
Position
11:complement(join(561701..561784,562368..562598,563168..563608,564322..564855))
AA seq 429 aa
METGGNSLPSPSCGDAAKRRVCYFYEPEVGNYYYGQGHPMKPHRIRMTHALLSNYGLLDS
LEVIRPVPARERDLCRFHSDDYVAFLRGVTPETQHDHPKALRRYNVCDDCPVFEGLYAFC
QTYAGASVGAAVKLNHGAHDIAINWAGGLHHAKRSGASGFCYVNDIVLAILELLKWHERV
LYVDIDIHHGDGVEEAFYTTDRVMTASFHKFGDYFPGTGHRHDIGYGKGKYYAVNVPLQE
GIDDESYHSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRS
FNVPLMVLGGGGYTLRNVARCWCYETGVALGVEVDDKVPEHDYSGYFAPDYTLHVAPSNM
ENKNSRQSLDDIRTEILENLSRLQHAPSVQFQERPPDLMLDEVDENQEDGDERYSPNSDE
EMDGPSPSS
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggaaaccggtggtaactctttgccgtcaccttcttgcggcgatgccgccaagcgtcgc
gtgtgctacttttacgagccggaggtgggaaactactactacgggcagggtcacccgatg
aagccccaccggatccggatgacccacgcgctcctctccaactacgggttattggattct
ctcgaggtgatccgacccgtgcccgcgcgcgagcgcgacctgtgccgcttccactccgac
gactacgtcgccttcctccgcggcgtgacgccggagacgcagcacgaccacccgaaagcc
ctccgccggtataacgtctgcgacgactgcccggtcttcgagggcctttatgcgttctgc
cagacctacgccggcgcctccgtcggcgccgccgtcaagctcaaccatggggcccacgac
attgctatcaattgggcgggtgggctccatcatgcgaagagatcaggggcctcggggttc
tgctatgttaacgacatcgtgctcgccatcttagagctgctcaagtggcacgagcgtgtt
ctgtatgtggacattgatatacaccatggagatggtgtcgaggaggctttctacacaact
gatcgagtaatgactgcatcattccataaatttggagattactttcctgggacagggcac
aggcacgatattgggtatggaaagggaaaatattatgctgtaaatgttcctttacaggag
ggtattgacgatgagagctatcactctttgttcaaacctatcgttgggaaagttatggaa
gttttcaggcctggtgctgtcgtgcttcagtgtggtgctgactccttatctggagatcga
ttgggttgtttcaatctctccatcaaaggccatgcagagtgtgtgagatacatgagatcg
tttaatgtgccactcatggtactcggtggtggcggttatacgcttcgtaatgtggctcgc
tgctggtgctacgagacaggagttgctctcggtgtagaagttgatgacaaggtcccagaa
catgactattctggatactttgctcctgattatactcttcacgtggcacctagtaatatg
gagaacaagaattcccgccagtccttggatgatattagaacagaaattctagaaaatctt
tcgaggctccagcatgctccaagtgtccaatttcaagaacgcccacctgatttaatgctt
gatgaggtagatgagaatcaagaggatggagatgaaaggtacagtcctaattcagatgaa
gaaatggacggtccctcaccatccagctaa

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