KEGG   Typha angustifolia (narrow-leaf cattail): 140769534
Entry
140769534         CDS       T11061                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    140769534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tang03021]
    140769534
Enzymes [BR:tang01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     140769534
Transcription machinery [BR:tang03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     140769534
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 Zf_2nd_IFT121
Other DBs
NCBI-GeneID: 140769534
NCBI-ProteinID: XP_072966358
LinkDB
Position
11:join(14719392..14719411,14719515..14719596,14719686..14719807,14719904..14719996,14721075..14721147,14721230..14721320,14721429..14721481,14722314..14722378,14724195..14724300,14724377..14724487,14725684..14725743,14727183..14727221,14727518..14727568,14727641..14727739,14731126..14731185,14731274..14731366,14732803..14732904,14732985..14733095,14733208..14733324,14734003..14734119,14734209..14734289,14737312..14737416,14737501..14737581,14737665..14737835,14737917..14737961,14740620..14740697,14740765..14740904,14740993..14741092,14743063..14743178,14743259..14743394,14743484..14743614,14745212..14745337,14745408..14745463,14746013..14746083,14746816..14746900,14747015..14747118,14747916..14748044,14748640..14748690)
AA seq 1156 aa
MGLREEDLGVNHRFLAAPVKSAVDKFELLPAFLKVRGLVKQHIDSFNYFVNHGIKKIMKA
NDRLVARHDPTLFLRYTNIYIDRPTVAVDYTNEKLTPHFCRLSDRTYAAPVKVDIEYTKG
NQANKVLEFKKGVTIARIPIMLRSCRCVLSGKDEAELAKLGECPLDPGGYFIVKGTEKVI
LIQEQLSKNRIIIDTDSKGRVSASVTSSTHETKSKTVFFMDKEKIYLQLNQFIKPIPIMV
IMKAMGMESDQEIVQMVGRDPRYGALLLPSIQECASESIYTQQKALEYMDGKVAHSNSAK
AGNGKEGRAKSILLDVFLANVPVTDGDFRPKCIYAAVMLRRMMDAILNTDTFDDKDYVGN
KRLELSGQLISLLFEDLFKTMNSFALERLNKAYEQASRSSPLDFSHYIVTEFITCGLEKA
ISTGNWDLKRFKMHRKGVSQVLSRLSFIGALGHMTRISPQFEKSRKVSGPRALQPSQWGM
LCPCDTPEGEACGLTKNLALMTHVTTDEEESPLITLCYSLGVEDLSILSGEEIHAPGSFL
VMLNGLILGKHRQPQRFANAMRRLRRSGKIGEFVSIFVNEKQCCVYVASDGGRVCRPLVI
ADKGISRIKEQHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALIALYELGDDKDGSETE
KDDVKKSCITHIEIEPLTILGIVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIGYNQLCRA
DTLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRG
FGRCIAMKKYTVVKETYGPNISDKIVKPQRDKDGVLLRQNMQILDADGIASPGEIIRNHD
VYVNKQTPVNISDRSGTLRERDYKDTPAMYRGPEGETTVVDRVMLCSDTNDKLSIKFIIR
HTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIEL
LGGKAGVSCGRFHYGSAFGEPSGNADKVEDISDTLVKHGFSYNGKDFLYSGITGYPLQAY
IFMGPIYYQKLKHMVLDKMHARAKGPRVTLTRQPTEGRSRDGGLRLGEMERDCLIAYGAS
MLIHERLMLSSDPYQVQVCRKCGLLGYYNHKLKTSFCSMCKSGENIATMKLPYACKLLFQ
ELQAMNVVPRLKLTEA
NT seq 3471 nt   +upstreamnt  +downstreamnt
atgggattgcgagaggaagacctcggagtaaatcacaggttcttggcagcccccgtgaaa
tcggctgtggacaagtttgagcttcttcccgccttcctcaaggtgagaggacttgtgaaa
cagcacatcgactccttcaattactttgttaaccatgggatcaagaagatcatgaaggcc
aacgaccgcctcgtcgcccgccatgatccaaccctattcctcaggtacaccaatatctac
attgatagaccaactgttgcggtggattacaccaatgagaagctaacaccacacttttgc
cgcctctctgatcgcacttatgcggctcctgtaaaggttgacatagaatatacaaaagga
aaccaggcgaataaggttctcgagttcaagaaaggcgtcaccattgcacgtattcctatt
atgctccggagttgccgctgcgtcctaagtggcaaggatgaagctgaacttgcaaaactt
ggcgagtgtcctcttgatcctgggggatattttattgttaaaggaacggaaaaggtgatc
ttgatacaggagcaactctccaaaaatcgtattatcattgatactgacagtaagggcagg
gtgtcagcgtctgttacaagcagcactcatgaaacaaaaagcaagacggtcttttttatg
gataaagaaaagatatatctgcaacttaatcaatttattaagccgattcctattatggtg
atcatgaaagctatgggaatggaaagtgatcaagagattgttcaaatggttggaagagat
ccacgatatggagctcttctccttccatcaattcaggaatgcgcatctgagagcatatat
actcaacagaaggctctggaatatatggatggaaaggtagcgcattctaattcagcaaaa
gcggggaatggaaaggaaggtcgagctaagtcaattctccttgacgtctttcttgccaat
gtgccggttactgatggagattttcgaccaaaatgcatatatgctgctgtgatgctaaga
cgcatgatggatgcaattctgaatactgacacttttgatgacaaggactacgtaggcaac
aagaggctggagctgtcagggcagcttatatcattgctttttgaggatttgttcaaaaca
atgaattcctttgctttagaacgtttgaacaaagcttatgaacaagctagtcgctccagt
cctttggattttagtcattatatagtgacagaattcataacttgtggcttggagaaggcc
atctctactggaaactgggacttgaagcgctttaagatgcataggaaaggtgtatcacag
gttctttctaggttgtctttcattggtgctttaggtcatatgacacgcatatcaccgcaa
tttgaaaagtctcgaaaagtgagtggaccaagggctttgcagcctagtcagtggggcatg
ctttgtccatgtgacactcctgaaggggaagcgtgtggattgactaaaaatttagcttta
atgactcatgttacaactgatgaggaagaaagtccactgatcactctgtgttatagttta
ggtgttgaagacttgtcaattctatctggagaagaaattcatgcaccaggttcatttttg
gttatgctaaatgggcttatacttgggaaacataggcaaccacagcgctttgctaatgcc
atgagaagattgcgccgatcaggtaagatcggggagttcgtcagcatttttgttaatgag
aagcagtgctgcgtttatgttgcctcggatggaggtcgtgtttgtcgtccacttgtgatt
gctgacaagggaatatcaagaatcaaggaacaacatatgaaagaactacgggatggagtc
cgtacttttgatgattttttacgtgatggattgattgagtatcttgatgtcaatgaagag
aacaatgccttgattgcattgtatgagcttggagatgataaagatggatctgagacagaa
aaggatgatgttaagaaaagctgcataacacatatagagatcgaaccgctcaccatttta
gggattgtagctggtcttattccttatcctcatcataaccagtctccacgaaatacctat
cagtgcgcaatgggaaagcaagcaatgggaaatatcggttataaccagctgtgtcgagct
gacactctactttacctgctagtgtatccacaacgtcctttgctgacaacaaaaacaatc
gagctggttggatatgataagcttggagctggacagaatgctactgtagctgttatgagt
tacagtggttatgacattgaggatgctattgtcatgaataaatcctctcttgatcgtggt
tttggtcggtgcatagcaatgaaaaagtatacagttgtcaaagagacttatggtcctaat
atatctgacaaaattgtcaagcctcaaagagataaagatggtgtcttacttaggcagaat
atgcagatactagatgctgatggaattgcttcacctggtgaaataattcgcaatcatgat
gtttatgtaaacaaacaaactcctgtaaatatttctgacagaagtggtactctgagagag
agggactacaaggatacacctgctatgtacagaggccctgaaggtgaaactactgttgtt
gatcgtgtaatgctttgttcagatacaaatgacaagttatccattaaatttatcatccgg
cacacgcggaggccagaagttggtgacaaatttagtagcaggcatggccagaaaggtgtt
tgtggcactatagttcagcaggaagactttcccttttctgagcgtggaatatgccctgat
ttgatcatgaatccacatggatttccaagtcgaatgaccataggcaaaatgattgagctc
cttggtggcaaagctggagtatcctgtggtagatttcattatggtagtgcgtttggtgaa
ccaagtggcaatgctgataaagtggaagacataagtgatacacttgtaaagcatgggttt
agctacaatggcaaggatttcttatattcaggcattacaggttatccacttcaagcatat
atatttatggggccaatctactaccaaaagttgaaacacatggtgcttgataagatgcat
gctagagctaaaggaccacgtgtaacgcttactaggcaaccaactgaagggagaagtcgt
gatggaggacttcgtttaggagaaatggaacgtgactgtttgatagcatatggtgctagc
atgttaatccacgaacgtctaatgttatctagcgacccttatcaagttcaggtatgcaga
aaatgtggtttgttaggttattacaatcacaagttgaagacatccttttgctcaatgtgc
aaaagtggagaaaatatagctaccatgaaactgccatatgcgtgcaaacttctgtttcag
gagttgcaggcgatgaacgttgttccacgtctgaagttaacagaagcttaa

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