Typha angustifolia (narrow-leaf cattail): 140769588
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Entry
140769588 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K15559
regulator of Ty1 transposition protein 103
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tang03021
]
140769588
Transcription machinery [BR:
tang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
140769588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
PspA_IM30
ALIX_LYPXL_bnd
P4Ha_N
POL2_thumb
ALMT
Motif
Other DBs
NCBI-GeneID:
140769588
NCBI-ProteinID:
XP_072966439
LinkDB
All DBs
Position
11:join(4368144..4368231,4369006..4369253,4370893..4371048,4371171..4371327,4381755..4381894,4381986..4382021,4384857..4385726)
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AA seq
564 aa
AA seq
DB search
MKGEMNNAFNDQVLAEKLGKLNNSQQSIETLSHWCIFHRKKAKQVVQTWEKQFNISSREQ
KVSFLYLANDILQNSKRKGSEFINEFWKVLPGSLKHVYENEEENGKKVVLRLIEIWDERK
VFGSRGRALKDDILGDALPPPVETNGKSSNPIKVVKKDSNSIRIKLAVGGMPEKIVTAYQ
SVLDDHFNEDTALNKCKNSVSLLEKMEKDVNDACMHGNQQGSQLIIDLREQESNLKQCVQ
QLESVEATRVALVDQLKEALKEQELKLEFVRIQLQVAKAESQHASQMRERLVSAPNGLSP
TPTITNLPSDMTPLGEANPPSSRSITPQFQSPQPVTSFASTLSSAEEEHKKAAADVAARL
VASSSSAQVLTSILSSLVADEAASMNGGRTSGAFSASAPLFPVDKRPRLEKPMSISDMST
TSYFGQVQQPQKQISSVPLSLSQTSAPTMQPLSQSNQAQSPFPPPPPPLPPVLPPTVQQY
GQTSGVMVGTVPYGYTGNPLPPPPPLPSHVSVGLTRPGAPPPLPPLPPPQQQQQQLQSAT
AGFYQPPGIGFYGQVQSAPPVQRQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtgaaatgaataacgctttcaatgatcaagtattagctgagaaacttgggaag
ctcaacaattcacagcaaagcattgaaacattgtcacattggtgcatttttcaccggaag
aaagcaaaacaggttgttcagacatgggagaaacagttcaacatatcttcaagagaacaa
aaagtgtcttttctgtatctagcaaatgacatcttacagaatagtaagcgcaagggaagt
gaatttataaatgaattctggaaggtcctccccggatcattgaagcatgtatacgagaat
gaggaagaaaatggcaaaaaagtggtcctcagattaatagagatatgggatgaaaggaaa
gtgtttggatctcgtgggcgagcccttaaagatgatattcttggtgatgcccttcctcct
ccagtggagaccaatggaaagagctcaaatccaataaaagtagttaagaaagactccaat
tctataagaataaaactggctgtcggggggatgcctgaaaagatagtgactgcataccaa
tctgtattggatgatcatttcaatgaagatactgcgttaaacaaatgcaagaattctgtt
tctcttctggagaagatggagaaagatgttaatgatgcttgtatgcatggtaatcaacaa
ggatctcaattgattattgaccttcgagaacaggaaagcaatctgaagcaatgtgttcag
caacttgaaagtgtagaagccactagagtagccctggtagatcagctaaaggaagctctg
aaagaacaggagttaaagttggagtttgttcgcattcaactgcaagtcgcaaaagctgag
tctcagcatgccagccagatgagggagagactcgtttctgctcccaatggtctcagccct
acccccaccatcactaatcttccatcagatatgacacctcttggtgaagctaatccacct
tcctcaagatcgatcactccgcaattccaatctcctcaaccagtgacttcatttgcaagt
acactgagcagcgcagaggaggaacataaaaaagcagcagcagatgttgctgcaaggctt
gttgcgtcctcatcctcagcgcaagtgctgacctcgattctttcttctttggttgctgat
gaagctgcttccatgaatggaggtcgaacttctggagctttctcggccagtgcacctctt
ttcccagttgacaaaaggccaagacttgagaaacccatgtcaatctctgatatgagtact
acctcctactttgggcaggttcagcagccacagaagcaaatttcatctgttcctctctca
ctgtctcaaacttcagccccgaccatgcagccattgtcacagagtaaccaggcgcagtca
ccttttccaccgcctccaccacctcttccaccagtgcttccaccaacagtgcagcagtac
ggtcagaccagtggagtaatggtaggcactgtaccttatggatacactggtaatcctctg
cctcctccacctccattgccttctcatgtatcagtagggctgactaggccaggtgcaccc
ccaccgctacctccacttccgccaccacaacagcagcagcagcagctccaatcagccact
gctgggttttaccaaccaccagggatcgggttctatgggcaagtgcagtcagctccgcct
gtccagcgacagtga
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