Typha angustifolia (narrow-leaf cattail): 140769709
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Entry
140769709 CDS
T11061
Name
(RefSeq) uncharacterized protein isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03015
mRNA surveillance pathway
tang04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140769709
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
140769709
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tang01009
]
140769709
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140769709
03036 Chromosome and associated proteins [BR:
tang03036
]
140769709
Protein phosphatases and associated proteins [BR:
tang01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
140769709
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
140769709
Chromosome and associated proteins [BR:
tang03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
140769709
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPFR1_M
HEAT
PPP2R1A-like_HEAT
HEAT_2
PIK3R4-like_middle
RELCH_N
HEAT_EZ
HEAT_EF3_N
PDS5
Vac14_Fab1_bd
HEAT_GCN1_C
RELCH_C
TPR_DNAAF5
CLASP_N
Htt_N-HEAT_1
TOR1L1_N
Cnd1
Adaptin_N
HEAT_MROH2B_C
HEAT_GCN1
HEAT_GCN1_2
HEAT_DAAF5
HEAT_GCN1_C_2
DUF3102
Motif
Other DBs
NCBI-GeneID:
140769709
NCBI-ProteinID:
XP_072966639
LinkDB
All DBs
Position
11:complement(join(7131898..7132017,7132116..7132182,7132260..7132399,7134761..7134853,7135601..7135783,7143967..7144071,7145017..7145097,7145246..7145387,7145612..7145691,7145923..7146035,7148306..7148552,7155093..7155485))
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AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAILIDELKNEDIQLRLNSIRKLSTIARALGEERTRKELIPFLGENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLSPLETLCSVEETCVRDKAVESLCRIGAQMKEA
DLVDWFVPLVKRLAAGEWFTARVSSCGLFHIAYPSSPDQLKAELRSIYGQLCQDDMPMVR
RAAASSLGKFAATVEPSHLKAEIMTIFEDLTQDDQDSVRLLAVEGCAALGKLLETQDCVV
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRSDLAPAYVRLLRDNEAEVRIAA
AGKVTKFCQILSPQLAIQLILPCVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLL
PIFLSLLKDEFPDVRLNIISKLDHVNQVIGIDLLSQSLLPAIVELAEDKHWRVRLAIIEY
IPLLASQLGVGFFADKLGALCMQWLEDKVFSIRDAAANNLKRLAEEFGPEWAMQHIVPQV
LEKISNPHYLHRMTILQAVSLLAPILGADITCQKLLPVIIASSKDRVPNIKFNVAKVLQS
LIPMLEQTVVKNTIMPCLAELIEDPDVDVRNFALQALRACDNVMMPS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatgatcgacgagccactgtatccaattgctatattgatagatgagttgaaaaat
gaagatatccagctgcgtctgaactctatccggaaactctctactattgcacgagcattg
ggtgaggaaagaacaagaaaagaactaattccctttcttggtgaaaacaatgatgacgat
gatgaggtacttcttgcaatggcggaagagttgggcgtatttattccatatgttggagga
gtggaacatgctcatgttctactttctcccttggaaacattgtgctctgtagaagaaact
tgtgttagggacaaggctgtagaatcattgtgtcgaattggagcacaaatgaaggaagct
gatctagttgactggtttgtccctttggtaaagagactagcagctggtgaatggtttaca
gctcgagtgtcctcatgcggccttttccatattgcctatccaagttcacctgatcagttg
aaggcagaattaagatccatttatggccagttgtgccaagatgacatgccaatggttagg
agagctgctgcatccagcctaggaaaatttgctgctacagttgaaccgagccatttgaaa
gcagagatcatgacaatatttgaggatttaacacaagatgatcaagattcagtgcgcctt
ttggctgttgagggttgtgcagcacttgggaagttgttggaaacccaggactgtgtagtg
catattcttccggtcattgtcaatttctcacaggataaatcctggcgtgtgcggtatatg
gttgcaaatcaattatatgagctttgtgaagctgttggccctgaacctacaaggtcagat
ttagcgcctgcatatgttcgtcttcttcgtgataatgaggcagaagttcgaatagcagct
gcaggaaaggtgacaaagttttgccagatcttgagcccacaacttgcaatccagcttatt
cttccatgtgtgaaggaattgtcgtcagattcctcacaacatgttcgttcagctttggct
tcggttatcatgggcatggctccagtcctgggcaaggaagctactattgaacaacttctt
ccgatttttctctctttgttaaaggatgagtttcctgatgttcgactcaacataataagc
aaactcgatcatgtgaatcaggttattggaattgatttgttgtcccaatcattactacct
gcgattgtggagcttgctgaggataaacattggagagttcggctggccataattgaatat
attcctttattggcgagccagttaggtgttggattttttgctgataaattgggtgctctt
tgcatgcagtggttggaagataaggttttctcaattcgagatgcagctgctaataatttg
aagcgtctcgcagaagaatttggcccagaatgggcaatgcaacatatagttccacaggtg
ctggaaaagatcagtaatccacattatttgcaccgtatgaccattctgcaagcagtttct
ttactagctccaatcctcggtgccgatatcacatgccagaagttactgcctgtgatcata
gcttcctcaaaggacagggtacccaatattaaattcaatgtggcaaaggttttgcagtcc
ctcatacccatgcttgaacaaactgtggttaaaaatacaattatgccttgtttggctgag
cttatagaggatccagatgtggatgttagaaactttgcccttcaagcacttcgagcatgt
gataatgtcatgatgccaagctaa
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