KEGG   Typha angustifolia (narrow-leaf cattail): 140769766
Entry
140769766         CDS       T11061                                 
Name
(RefSeq) ubiquitin receptor RAD23b-like isoform X1
  KO
K10839  UV excision repair protein RAD23
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03420  Nucleotide excision repair
tang04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    140769766
  09124 Replication and repair
   03420 Nucleotide excision repair
    140769766
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:tang03051]
    140769766
   03400 DNA repair and recombination proteins [BR:tang03400]
    140769766
Proteasome [BR:tang03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    140769766
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      140769766
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD CUE UBA_3 TECR_N UBA_RAD5A RNase_PH_C Dsc3_N
Other DBs
NCBI-GeneID: 140769766
NCBI-ProteinID: XP_072966731
LinkDB
Position
11:join(3886059..3886124,3886715..3886876,3888621..3888659,3888741..3888799,3888898..3888942,3890737..3890914,3891000..3891146,3891230..3891295,3892334..3892381,3892461..3892570,3893858..3894116)
AA seq 392 aa
MKLTVKTLKGTHFEIRVHPSDTIMAVKKNIEDLQGKDNYPWGQQLLIHNGKVLKDESTLE
ENKVSEDGFLVVMLSKSKTSGAGGASSSQPSATPAVRQSAPVEAPQQPLASSNPATESER
PNSLVSVEAYGQAASNLVAGSNLDETVNQLMEMGGGNWDKDTVVRALRAAYNNPERAVDY
LYSGIPVTADVAAPFPSSQASDQGANPSATTPAGSSPLPGLPNSSPFDMFAQGSPNAGAG
AGAGTLDFLRNNQQFLALRNMVQANPQILQPMLQELSKQNPQLMRLIQEHHAEFLQLINE
PLEGVEGDLFDQPELEEMPHAVSVTPEEQEAIGRVFFLLLYIYMVLLLPDWILLQLEAMG
FDRERVIEAFLACDRNEQLAANYLLEHTGDED
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgaagctgacggtgaagacgctcaagggcacccacttcgaaatccgagtgcatccctcc
gatacgattatggctgtaaagaagaatattgaggatctacaaggcaaagataactatccg
tgggggcaacagcttttgattcacaatgggaaagttttgaaagatgaaagtacattagaa
gagaacaaagttagtgaggatggttttcttgttgtcatgctgagtaagagcaaaacttca
ggtgctggaggagcatcatcttcccagccttcggcaactcctgcagtcagacaatctgct
cctgtagaggctccacaacaacctctggcttcatcaaatcctgcaactgaatctgaaaga
ccaaattcacttgtctctgtggaggcatatggtcaggctgcatccaatctagttgcagga
agtaatcttgatgagacagtgaaccagttgatggagatgggtggtggtaattgggacaaa
gatacagttgtgagagcacttcgtgctgcttataacaatccagagcgtgctgtggattat
ttatattctggtattccggtgacagcagatgttgctgctcctttcccttcatctcaagca
tctgatcaaggggcaaacccaagtgcaactactcctgcagggtcatcacctcttcctgga
ctacccaattcctctccttttgatatgtttgcgcagggttctcccaatgcgggagccggt
gctggagctggtactcttgattttcttaggaataaccaacagtttctagcattgcgaaat
atggtccaagcaaatccacagattttgcagccaatgctccaagaattaagcaagcagaat
cctcaacttatgagattgatccaggagcatcatgctgaatttcttcagctaataaatgaa
ccgctagaaggtgttgaaggggatctatttgatcagcctgagctggaggagatgccacat
gctgtcagtgtgacacctgaagagcaggaggctattggacgagtatttttcctcttattg
tacatttacatggttttactacttcctgactggattcttttacagcttgaagcaatgggg
ttcgacagagaacgtgtcattgaggccttcttggcctgtgataggaatgagcagttggca
gcaaactatctactggagcacacgggtgatgaagattaa

DBGET integrated database retrieval system