Typha angustifolia (narrow-leaf cattail): 140769863
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Entry
140769863 CDS
T11061
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00040
Pentose and glucuronate interconversions
tang01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140769863
Enzymes [BR:
tang01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140769863
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140769863
NCBI-ProteinID:
XP_072966853
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Position
11:complement(join(15854056..15854271,15854384..15854519,15854607..15854962,15855044..15855523))
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AA seq
395 aa
AA seq
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MSNTSSSLPSLMASNSITTSTMASSLKLLLFLFFIVVLPFLANAGNMNVIDRCWRGTPTW
AANRQRLAVCSVGFAGKMRMNGGKGLTWYTVTDPADDPVRPRPGTLRYGATMLRGKVWIT
FERDMQIKLEKPLLVKSFTTIDGRGANVQIAYGGGILLYNVNNVIIHGLQIHHCVEQPPG
PVVGPGGKITQLGGLDGDAIRLVASSKVWIDHNTLYQSQDGLIDVTRGSTFITISNNWFR
DHDKVMLLGHDDSYVEDAKMKVTVAFNRFGPNCNQRMPRIRHGYAHVANNLYDGWRDYAI
GGSMGPRVKSEGNLFIASNSSNKKVTRRIPGKFNSWNWQSVNDIFINGAFFKETGYGRVK
PAYNRQQRFKVGSANAVWALTRNAGALSCSATAGC
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatacctcctcatctctaccttctctcatggcttctaattctatcaccacttca
accatggcttcttcccttaaactactactcttcctcttcttcatcgtcgtcctccccttc
ctcgccaatgccggaaatatgaacgtcatcgacaggtgctggcgtggcacgccaacttgg
gcggccaataggcaacggctcgccgtttgctccgttggcttcgccggcaagatgaggatg
aacggagggaagggtttgacgtggtacaccgtgaccgatccggccgacgatccggtgcgt
cctcggcctggcacgctgcgctacggcgccacgatgcttcggggcaaggtttggatcacc
ttcgaaagagacatgcagatcaagctcgagaagccgctcctcgtcaagagcttcaccacc
atcgacggccgcggcgccaacgttcagatcgcctacggcggcggcattctgctgtacaac
gtgaacaacgtgatcatccacgggctacaaatccaccattgcgtcgagcagcctcccggt
ccggtggtcggccccggcgggaagataactcagctcggtgggctcgacggcgatgccatt
aggctggtggcttcttccaaagtttggatcgaccacaacactctgtaccagagccaagac
ggacttatagatgtgactcggggttcgacgttcataaccatctccaacaactggtttaga
gaccacgacaaggtgatgctcctcggccacgatgacagctacgtggaagacgccaagatg
aaggtgaccgttgcgttcaatcgattcggtcccaactgcaaccagcgcatgccaaggata
aggcatggatatgctcatgtggcgaataatttatacgatggatggcgagattatgcaatc
ggtggaagcatggggccgagggtcaaaagcgaggggaacctgttcattgcatcaaactcc
agcaacaagaaggtgactcggcgaatccccggaaagtttaactcatggaactggcaatca
gtgaatgatatcttcatcaatggagcatttttcaaggaaacagggtatggtagagtaaag
ccagcttacaaccggcagcagaggtttaaggttggaagtgccaatgccgtgtgggcgctg
acgaggaatgccggagcccttagctgctctgcaactgctggatgctga
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