Typha angustifolia (narrow-leaf cattail): 140770053
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Entry
140770053 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K19022
AP-5 complex subunit beta-1
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tang03400
]
140770053
DNA repair and recombination proteins [BR:
tang03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
140770053
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
140770053
NCBI-ProteinID:
XP_072967137
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All DBs
Position
11:complement(join(15720806..15722246,15722329..15722768,15722857..15724305))
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AA seq
1109 aa
AA seq
DB search
MEKQSSPPPPPPSPSPQLSPQDWDFLLDDFSSGDLSRRSRWLHLPLLDLALLSILRRDFP
SSLKPLLLLFLEDSLPVLPLPTPPLPSLLDALRSIDSSLKDQFLISTTSIAISVLSSPPL
SPSSASDLASLTELLLAVANRPSHGPDRQTRAVACECLRELETAFPGLLSDVAGHVWELA
QAERTHAAQSYLLLLAVVARNVVQFGLLASNVSIFSTATPLVPLNVPQLLLFPASESFDT
NPAPSDVNLREIKRLVAFLMERSQALTPAATMELVATLVGIVGAVEAWVPAVPALLKVQF
SGLLYSYDPILCHVVLMLYCRFSDVFAGDDESGIARRLAFIAKEAYQPLVFRLLALHWLL
GSPRLANGENSLIPLVPCFYPAVFDPLALKVKKLDALARVAARIDASSGEKKDMVVVKLF
EDGLVCVSTFKWLPPWSTETSVAFRAFHKLLVEVVPHSIDASDSSDSSWFGALLESTIFN
NLQCVLVRLALEHRGLVPVIAAFIDRLLGCEAHRRVGEQLLQTLDERLLPKLEEGYQLSS
YFSLFEKIAQNDTVPPRGLLGLLTKHMTWLAKKHGPDTGLRSWSQGSKVLGICRTMLKHH
HSSRVFRPLSCLLGYTCQSFPDLEVRDNARIYLRMLACIPGKKLRHILGIGEQSSSVSSS
PHPGSLFQVPSPRVARDLKKSSGVASYIHLERVVPLLVKQSWSLTLPNLSIQSNGGSSSG
GFQDISSSPSLQSEKEIDVSIEKISKQKEPLRVMDSEVAEILGVLRRHFSCIPDYRYMPG
IKIRIRCILRFEAEPFSRIWGSASASRTEVVDELPAMYATTITFSSTSKFGKIPPCRVPF
LIGEPAIGGLDLVPVDNNSREDSNYLALVLIELEPREPMPGLIDVAIEANAENGQIISGP
LQSITVGIEDMFLRVTVPPDIPEYGVTEYYADLFHALWEACGDSANTGRETFPLSGGKGS
AAIYGTRSVKLLEVSADSLIRAVERHLAPFVVTVVGDPLVNSVRANGMIRDIVWEEDGSD
FSVHEGDALVPYSQSMPLQLQFIENETNLENPPLMNKRHIGLFHVLIFLPPRFHLLFLME
VGDTSTLVRIRTDHWPCLAYVDEYLEALL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaatcctctcctcctcctcctcctccttctccttctcctcaactctccccc
caagattgggacttcctcctcgacgacttctcctccggcgacctctctcgtcgttcccgg
tggcttcacctccccctactcgacctcgccctcttatccatcctccgccgcgacttccct
tcctctctcaaacccctccttctcctcttcctcgaagactcgcttcccgtcctcccgtta
cctactccccctctcccgtccctcctcgatgccctccgttccatcgattcatctctcaaa
gaccagttcttgatatcgaccacctccatcgccatctccgtgctgagctctccgccgctc
tccccttcctcggcgtcggatttggcgtcgctaacggagctcctcctcgccgtcgcaaac
cgccccagccacggccccgatcgacaaacacgcgccgtcgcctgcgagtgtctccgggag
ctcgagaccgcgttccccggcctcctctccgacgtcgccggccacgtgtgggagctcgcg
caagccgagcgcacccacgccgcccaatcttacctcctcctccttgccgtcgtcgcgagg
aacgtcgtccagttcggccttctcgcttcgaatgtttcgatcttttccaccgccacccct
cttgtccccttaaatgtcccccaattgctccttttcccggcgtcggagtcgtttgataca
aatccggcaccttcggatgtgaatttgagggagattaagaggttggtggcgttcctaatg
gagcggtcacaggcactgacgccggcggctacgatggagctggtggccactctcgtgggc
atcgttggcgctgtggaggcgtgggtgccggcggtgccggcgctgctgaaggtgcagttc
tctggcctgctttactcctatgatcctatcctctgccatgttgtgctgatgctgtattgc
cgcttctcagatgtgttcgccggcgacgatgagtccggcatcgcccgccgcctcgctttc
attgctaaagaagcctaccaacccctcgtgttccgcctcctcgccctccattggttgctc
ggctcgccgagattagccaacggcgagaactcgctcattcccctggtgccgtgcttttac
ccggcagtgttcgatccactcgcactgaaagttaagaaattagatgccctcgcacgagtt
gcagctcgtattgatgcttccagtggtgagaagaaggatatggtggtggtgaagctcttt
gaggatggattggtttgcgtttctacattcaagtggcttccaccatggagcacagagacc
tcggtggcctttcgggcattccacaagctcttggttgaagtagtaccgcatagcattgat
gcctctgattcctctgattcctcttggtttggcgctctcctggagtctaccatcttcaac
aatcttcagtgtgttctggtgcgtttggcattggagcatcgcggattggttccggttatt
gctgcttttatcgatcggcttttaggatgcgaagcacatcgccgagtgggcgagcaattg
ctccagacactcgacgaacgcctgcttccgaagcttgaagaaggctaccaactgtcctcg
tatttttctctttttgagaaaattgctcagaatgatacagtaccaccgcgaggcttgtta
gggttgctcaccaagcacatgacttggcttgctaagaagcatggtccagatactggattg
aggtcatggtctcaagggagtaaagtgttaggcatctgccgcacgatgcttaagcatcac
cacagctcccgagtgttccgtcctctttcatgccttcttggctacacctgtcaatccttt
cctgacttggaggtccgcgacaatgcgaggatctacttgcggatgcttgcatgcattccc
gggaagaagctgaggcacatacttggtattggtgagcaatcttcaagtgtctcatcttct
cctcatcctggttctctgttccaagtaccatcacctcgtgtggctcgagatttaaaaaaa
tcatctggtgttgcttcttatatccatcttgagagggttgttccactgcttgtcaagcaa
tcatggtctctaacactgcctaatcttagcattcaaagtaatggaggcagttcttccggg
gggtttcaggacatcagttcgagcccatctttgcagtcagaaaaggagattgatgtaagc
atagagaaaattagtaagcaaaaggaaccactgcgtgtgatggattcagaggttgcagaa
atactgggagtactacgaaggcatttttcatgtattccagactaccgatacatgcctgga
attaaaataagaatacgatgtatacttagatttgaggctgaaccatttagccgtatctgg
ggatctgcatctgcttcgagaactgaagtggttgatgagttgcctgctatgtatgcaact
acaatcactttttcttcgacatcaaagtttggtaaaattcctccttgtcgggttcctttt
cttattggtgaacctgcaattggtggactggacttagttcctgtagacaacaattctcgg
gaagattcaaattatcttgctttggtacttatagaattggaacctcgagaaccaatgcct
ggtctaattgatgttgccatcgaggcaaatgctgagaatgggcagataatatccggacca
cttcagagcatcactgttggtattgaggacatgtttctcagggttactgtaccacctgat
attcctgaatatggagtcaccgaatactatgcagatttgtttcatgctttatgggaagca
tgtggcgactctgcaaatactggacgagaaacctttcctttgagtggtggtaaaggatct
gcggccatctacgggacaagatctgttaagcttctcgaagtatctgcagattctttgatc
agggcagtagaaagacaccttgctccttttgttgtcactgttgttggcgatccacttgtg
aactctgttagagcaaatggaatgatcagggacattgtctgggaagaagatggctcagat
ttttctgttcatgaaggtgatgctttggttccatactcacaaagcatgccacttcagctt
cagttcattgagaatgaaactaatttggaaaatcctccactaatgaataagaggcacata
ggtctcttccatgttttgatattcttgccacccaggtttcatctacttttcttgatggaa
gtgggtgatacttccacattggttcgaataagaactgatcattggccatgcctggcgtac
gtcgatgaatacttggaagctctgctttaa
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