Typha angustifolia (narrow-leaf cattail): 140770131
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Entry
140770131 CDS
T11061
Name
(RefSeq) LOW QUALITY PROTEIN: cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140770131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tang03009
]
140770131
Ribosome biogenesis [BR:
tang03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
140770131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
TIP49
AAA_14
AAA_2
AAA_28
RNA_helicase
AAA_17
AAA_33
AAA_22
Rad17
AAA_16
nSTAND3
NPHP3_N
AAA_25
AAA_18
Vps4_C
NTPase_1
NB-ARC
Mg_chelatase
IstB_IS21
Bac_DnaA
Cytidylate_kin2
ATPase_2
ABC_tran
TsaE
Viral_helicase1
NACHT
AAA_3
Parvo_NS1
SKI
tRNA_lig_kinase
AAA_11
CPT
PduV-EutP
dNK
Motif
Other DBs
NCBI-GeneID:
140770131
NCBI-ProteinID:
XP_072967246
LinkDB
All DBs
Position
11:join(10600582..10601086,10601410..10602019,10603317..10603469,10603736..10603852,10603994..10604093,10604567..10604632,10604752..10604816,10604890..10605091,10605227..10605367,10605633..10605680)
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AA seq
668 aa
AA seq
DB search
MPDDSVFETKVDPVFDLTKSMLRDTYGKKSLLNPKSRKEDDNMEIEVAQDKPRRIKTSDG
SVVETRVIEKSRKGGSFGEVDNREEGRAGPKFKDLGGMKDVIEELMMHVLIPLFHPQLPR
WIGMRPIAGILLHGPPGCGKTTLAHAIANEAGVPFFKISAPEVVSGVSGASEEYIRDLFK
KAYRASPSIVFIDEIDAIASKRENMQREMERRIVTQLMTCMDEFHQTVGLSDANLNPEIS
ERKPGYVLVIGATNRPDAVDQALRRPGRFDREIALGVPDENARVEILSMLTRNLRLEGHF
DLFKIARSTPGFVGADLKALVDIVGYLALERIVHRRMDQLSCELADISVWRRQSWDTEEM
ESLSITMEDFERAAKMVQPSLRREGFSSIPDVTWDDVGGLNSLRKEFDRHIVQRIKCPEK
YEKLGVHLAVGFLLYGPPGCGKILIAKAVANEAGANFIHIKGPELLSKYVGESESEVRKI
FTRAQXSPCIVFFDEVEALLTKRGKEGGWVVERVLNQLLIELDGADQRQGVYVIGATNRI
EVIDPAVLRPGRFGKVIFVPLPGANERGLIMKAHARKMSIAADVDFNNLAHREELENFTG
ADLSNVMHEAAMSVLDEEMDFTDKEVSCNSTCFIKTLHFEKALAKVRPSVSEKERRYYEV
ISQKFKAS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgattccgtctttgaaacaaaggttgatccggtgttcgatctgacgaaatcc
atgcttagagatacttacggtaagaaatcgttacttaatccgaagagcaggaaggaagat
gataacatggagattgaggtggcgcaagataagccaaggaggataaagaccagcgatggg
agtgtggtcgagacccgagtgattgagaagtcgagaaaaggtggcagcttcggtgaggtg
gataatagagaggaagggagggcagggccgaagtttaaagatcttggtgggatgaaagac
gtaatcgaggagttgatgatgcatgtccttatacctttgttccatccgcaactaccaaga
tggattggcatgaggccaatagcagggatactgctgcatgggccacctggttgtgggaag
acgacgcttgcccatgcaattgcgaatgaggccggtgtgcccttctttaagatatctgct
cctgaagtggtatctggggtttctggtgcttctgaagaatacatacgagaccttttcaag
aaagcttatcgtgcttctccttcaattgtctttattgatgagattgatgccattgcatcc
aagagggagagaatatgcagagggagatggaacgccggattgtcacacagttaatgacat
gcatggatgaattccaccaaacagttggattaagtgatgctaatttaaatccagaaatat
ctgaacgcaaacctggatatgttcttgtgattggagctacaaacagacctgatgcagtgg
accaagcattgagaagacctgggaggtttgaccgtgagatagctttgggtgtccctgatg
agaatgcacgggttgagatcctatctatgcttactcggaaccttagacttgagggccatt
tcgacctcttcaagatagccagatctacaccaggttttgttggagctgatctgaaagcat
tggtggatatagtaggatacttggcattggagagaatagtacataggcgaatggaccaac
tttcttgtgagctggcggacataagtgtttggagaaggcaatcttgggataccgaagaaa
tggagagcctaagtattactatggaagactttgagagagcagctaaaatggttcaacctt
ctttgagaagagaagggttttcttctatacctgatgttacatgggatgatgttggtggtc
ttaactcattaaggaaagaatttgatcgtcacattgtccagcggatcaagtgtcctgaaa
agtatgagaaattaggagtacatttggctgtcggatttttgctatatggacctccaggtt
gtggcaaaatattgatcgcaaaagctgtagcaaatgaagcaggagctaattttatacata
ttaaggggcctgaattgttgagtaagtatgttggtgagagtgaatcagaagtaagaaaaa
tatttacccgtgcccagctctccatgcatagtgttctttgatgaggtagaagctttgttg
acaaagaggggcaaagaaggaggatgggttgttgagcgtgtcctaaaccagctactcatt
gagcttgatggtgctgatcagaggcaaggcgtttatgttattggagctacgaacagaata
gaggtgatagatcctgctgtcttacgaccaggaagatttggaaaagtcatttttgtacct
ctacctggagctaatgaacgtggattgattatgaaagcacatgctcgaaagatgtctatt
gctgctgatgtagatttcaacaatttggcgcatagagaggagcttgagaattttacaggg
gctgatttgtctaatgtgatgcacgaagctgccatgagtgtgttggatgaagaaatggat
ttcactgacaaagaggtgtcatgtaactctacatgttttatcaagacattgcatttcgag
aaagctttggcaaaagtaagaccatcagtatcagaaaaggaaagaagatactatgaagtc
atatcccagaagttcaaagcttcttga
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