Typha angustifolia (narrow-leaf cattail): 140770157
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Entry
140770157 CDS
T11061
Name
(RefSeq) RNA polymerase sigma factor SigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tang03021
]
140770157
Transcription machinery [BR:
tang03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
140770157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
DUF5962
Motif
Other DBs
NCBI-GeneID:
140770157
NCBI-ProteinID:
XP_072967289
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All DBs
Position
11:join(1575950..1576534,1576725..1576871,1577306..1577542,1578225..1578488,1578646..1578840)
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AA seq
475 aa
AA seq
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MGAAAVPSSASQAPFAAGGRRSAPFRRLFVFSALDSNAPTKCPILVLSISTKQSTRVNAV
SIEEAPPATSPLSPPSESFAVEFDYNEVAAALESIYELSPADFSDVEEGRIEKGNEDVGF
VKVVRNSERKVERLSLEKRVALKRRRRRRKEEDGVVRDQYASNDLGSLDWKKTKIPPVLS
SSEQMRLFKMMQPMKAIYGVKQNLHSDLLREPSHGEMAAVLSISVSELRRQVEVGRAARN
KLIKHNLRLVLFFINKYYPEIANGQKFQDLCQAGAEGLIKAIDRFEPKRGCRLSTYGLFW
IRHSIIRSMTLSSFTRVPLGIQSFRQEIQKTKLKLSFEFGRQPTEKEIIDHVGISQERYY
DIIKTSKPVLSLNSKHGVTQEEFIKGITDIDSVGGNKRRQPAVIRLALDDVLDSLKPKES
LVIRQRYGLDGKGDRTLGEIAGNLNISREMVQQHELKALMKLKHPVRVDYLRRYV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgggagcggccgccgtccccagctcggcctcccaggctccgttcgccgcaggcggacgg
aggtcagcgccgttccggcgactgttcgtcttctcggccttggattccaatgcgcccacc
aaatgtccgatcttggtcctctccatttccaccaagcagtctacgagagttaatgccgtc
tcgatagaggaagccccccctgctacctctcctctgtctcctccctccgagtctttcgcc
gtagagttcgattacaacgaggtggccgccgcgctcgagagcatctacgagctcagccct
gcagacttctcggacgtagaggaaggaaggatcgagaagggaaatgaagacgttggtttt
gttaaggtggtcaggaatagtgagaggaaggtggaaaggttgagtcttgagaagagggta
gctttgaagaggcggagaaggaggaggaaagaagaggacggtgtggtgagggatcaatat
gcttcgaacgacttgggtagcttggattggaagaagacgaaaattcctcccgtgcttagt
tcctcagagcaaatgcggttgtttaagatgatgcaaccgatgaaggcaatatatggtgtg
aagcaaaacttgcatagcgatctgcttcgggaaccatcacacggcgaaatggctgctgta
ctgagtattagtgtctcagagttaagacgacaagttgaggttggtcgagcagcaaggaac
aaactaattaagcataacctccgcttagttttatttttcatcaacaaatactacccggag
attgcgaatggccagaagttccaagatctctgtcaagctggtgcagagggcctcattaag
gccattgataggtttgaaccgaagcgtggctgccggctatccacatacggtctcttctgg
atcaggcactccataattcgatccatgacactctcaagcttcacaagagtcccccttggg
atccaatcgttcagacaagagatccaaaaaaccaaactaaagttgtcatttgaatttgga
agacaaccgacagagaaagaaatcattgaccatgtaggaatatcacaagagagatattat
gatatcatcaagacctcaaaaccagtcttatcccttaattccaagcatggtgtgacacaa
gaagagtttatcaagggaatcactgatattgacagcgtgggtggaaacaaacgcagacaa
ccagcagttatccgacttgctcttgatgatgtgctagattcactgaagcccaaggagagt
ctagttatcagacagagatatgggctcgacggcaagggtgacaggactttgggagagatt
gcaggaaacctcaatatttcaagagagatggtccagcagcatgaattgaaggcacttatg
aagctcaagcatccggttcgtgtcgactacctccgtagatatgtctga
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