KEGG   Typha angustifolia (narrow-leaf cattail): 140770478
Entry
140770478         CDS       T11061                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03083  Polycomb repressive complex
tang04120  Ubiquitin mediated proteolysis
tang04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    140770478
   04120 Ubiquitin mediated proteolysis
    140770478
  09126 Chromosome
   03083 Polycomb repressive complex
    140770478
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tang04131]
    140770478
   04121 Ubiquitin system [BR:tang04121]
    140770478
   03036 Chromosome and associated proteins [BR:tang03036]
    140770478
Membrane trafficking [BR:tang04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    140770478
Ubiquitin system [BR:tang04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     140770478
   Cul7 complex
     140770478
Chromosome and associated proteins [BR:tang03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     140770478
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     140770478
SSDB
Motif
Pfam: Skp1 Skp1_POZ RuBisCO_large_N DUF1378
Other DBs
NCBI-GeneID: 140770478
NCBI-ProteinID: XP_072967792
LinkDB
Position
2:complement(join(7385539..7385712,7389123..7389431))
AA seq 160 aa
MAKKITLKSSDGEVFEVEELVAMESQTIKHMIEDDCVENSIPLPNVTSKILSKVIEYCKK
HVDAAAASKASADESSKAADEELKQWDSEFVKVDQATLFDLILAANYLNIKGLLDLTCQT
VADMIKGKTPEEIRKTFNIKNDFSPEEEEEVRRENQWAFE
NT seq 483 nt   +upstreamnt  +downstreamnt
atggcgaagaagataaccctgaagagctcggacggcgaggtgttcgaggtggaggaattg
gttgccatggagtcgcaaacgatcaagcacatgatcgaggacgactgcgtcgagaacagc
atcccgctcccaaacgtcacctccaagatcctctccaaggtcatcgagtactgcaagaag
cacgtcgacgctgctgccgcatccaaggcgtcggcggacgagtcgtcgaaggcggctgat
gaggagctcaagcagtgggactccgagttcgtcaaggttgaccaggccaccctcttcgac
ctcatcttggctgcaaactatctgaacatcaaaggactactggatttgacttgccaaact
gttgcagacatgattaaggggaagacaccagaagagattcgcaagactttcaacattaag
aatgacttttctccggaagaagaggaagaggtgcgaagggagaaccagtgggcttttgag
tga

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