Typha angustifolia (narrow-leaf cattail): 140770561
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Entry
140770561 CDS
T11061
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140770561
04121 Ubiquitin system [BR:
tang04121
]
140770561
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140770561
Membrane trafficking [BR:
tang04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
140770561
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140770561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING-like
zf-RING_16
zf-Nse
zf-HC5HC2H
zf-HC5HC2H_2
zf-RING_10
Zn_ribbon_8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
140770561
NCBI-ProteinID:
XP_072967902
LinkDB
All DBs
Position
11:15799386..15800486
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AA seq
366 aa
AA seq
DB search
MSSAPLFGAAAAPQRYFCHQCEANVTVVPSSPDADVTCPLCHGGFVEELESPNPNTNPHP
FFSFPSSDSFFLSSSSSPSPFPFLFSSPTPSAASFDLRQPSDVSVIFGSDQSPFRSVAVS
GGGAPFNPMTFLQDHFHQLLSGGANIQVVLEGGPIMAGGGSLGDYFIGPGLEQLIQQLAE
NDPNRYGTPPASKSAVNALPDIKISEELLASDEAQCAVCKDTFEIGVEAKQMPCKHIYHK
DCILPWLELHSSCPVCRYELPTDDPDNEQRRSGVPAAPASRAAAAGAGNSDGSAGSSPGA
SRDGNSPGPRMVERRFRISLPWPFRAFGSQAEPSNVRGGGQSDGGRSGGADANSGGQTET
RQEDLD
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgcccctttattcggcgccgccgccgcgccgcagcgctatttctgccaccag
tgcgaagccaacgtgacggtcgtcccctcctcgccggacgccgacgtcacttgccctctc
tgtcatgggggcttcgtggaggagctcgaaagccctaatcctaatactaaccctcatccc
ttcttctccttcccctcttccgactctttcttcctctcgtcatcctcctctccctcccct
ttccccttcctgttctcctcgccgactccttctgccgctagcttcgacctccgacaaccc
agcgacgtctccgttatatttggatccgatcaatcccccttccgatccgtcgctgtctcc
ggcggcggcgcccctttcaaccctatgacctttctccaggaccatttccaccagctcctg
tccggcggcgccaatatacaggtcgtcctcgagggaggcccgattatggctgggggcggt
agcctcggggattactttatcggccccgggctcgagcagctcatccagcagcttgcagag
aacgaccccaaccgctacggcacgccgccggcgtccaaatcagccgtcaacgccctcccg
gacatcaagatctcggaggagttgctcgcgtcggatgaggcacagtgcgccgtgtgcaag
gacacgttcgagattggcgtggaggcgaagcagatgccatgtaagcacatctaccacaag
gattgcatcctgccatggctcgagttgcatagttcttgcccggtttgccggtatgagttg
ccgacggatgatcccgataacgagcagcggaggtcgggagttcctgctgctcctgcaagt
cgggcggcggctgcaggggcaggtaattctgatggctctgctggatcgtcaccaggggct
tcaagggatgggaattctcctggaccaagaatggttgaaaggaggtttaggatttcactt
ccgtggccgtttagggcttttggatcacaagctgaacctagcaatgttagaggcggtggg
cagagtgatggtggcagaagtggtggtgctgatgcgaattctggcgggcaaactgagacc
cggcaagaggatttggattga
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integrated database retrieval system
