Typha angustifolia (narrow-leaf cattail): 140770580
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Entry
140770580 CDS
T11061
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic-like
KO
K02945
small subunit ribosomal protein S1
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
140770580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tang03011
]
140770580
Ribosome [BR:
tang03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
140770580
Bacteria
140770580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP4
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
140770580
NCBI-ProteinID:
XP_072967934
LinkDB
All DBs
Position
11:complement(join(651334..651528,651647..651695,651915..652040,652466..652563,653117..653197,653362..653433,653516..653590,653839..654657))
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AA seq
504 aa
AA seq
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MRAYSLPPLSGPNLSFSALPWLRTKAFPRTKPSSNSHLFLSPKSPILRRIHVAKSSPVHD
SGGSENAHVKETELELLEKPSPIPINEEEEEESSTTRKPPELEEALAPFLRFFKVRDSAD
EAKVNEESDVEVEVEEKEKIESKKEVPFEYYDPKPGDFVVGVVVSGNENKFDINIGADEL
GMMLTKEVLPLYDEELPYLLCDLGKDTDEFMVPGKVGVVKDEEGLNRGRVPGGAVVEPGT
VLFAEVLGRTLSGRPLLSARRMFRRVAWHRVRQIMQLNEPIEVKIFEWNTGGLLTRIEGL
RAFLPKAELMNKVNNFTDLKSNVGRQIRVCITRIDEATNDLIISEKEAWDMMHLKEGTLL
QGTVRKIFPYGAQVRIGESNRSGLLHISNITSSRVTSVNDILKVGEEVKVLVVKSMFPDK
IALSIADLESEPGLFLLDKEKVFTEAEKMAKMYRQKLPVISATRNSDPLLKDALPFDDEA
KYSNWKWFKFEQLNEVDSKENTGS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcttattccctcccccctctgtccggcccaaatctatccttctccgccctccca
tggcttcgaaccaaagcctttccaagaacgaagccttcttccaactcccatctcttcctc
tcgcctaaaagtccaattctgagacgaatccatgtcgccaaatcctctccagtccatgat
tccggtggatccgagaacgcccatgtcaaagaaactgagctcgaattgctcgagaagcca
tctccgataccaatcaacgaggaggaggaagaggagtcctccactactcggaaaccaccg
gaattggaagaggcattagctccattccttagattcttcaaggtgagggactcggcggat
gaagctaaggttaacgaagagagcgatgtggaagtcgaggttgaggagaaggaaaagatt
gagagtaaaaaggaagtcccttttgagtactacgacccaaagcctggcgatttcgtggta
ggtgtagtcgtgtcgggaaatgagaacaagttcgatattaacattggcgcggatgagttg
ggaatgatgttgacaaaggaagtgcttcctttgtatgatgaggagctgccttacctgcta
tgtgatcttggaaaagatacggatgagttcatggttccagggaaggttggagttgtgaaa
gatgaggagggattgaatagagggagggtgcccggaggagctgtcgtcgagccgggaacg
gttctcttcgcagaggtgcttggccggactttgagcgggaggccacttctgtctgcaaga
aggatgtttcggcgcgtcgcctggcacagagttaggcagataatgcaactaaatgagcct
attgaggttaaaatctttgaatggaatactggcggccttcttactcggattgagggactc
cgagcattccttcctaaagctgagttgatgaacaaagtaaataatttcacagacttgaag
agcaatgttggtcgccagatacgtgtatgcattaccaggatagatgaagcaactaatgac
ttgattattagtgaaaaagaagcctgggatatgatgcaccttaaagaaggaacactttta
caagggacagttcgcaaaatatttccatatggtgctcaagtaaggattggcgagagtaat
agaagtggtttgctgcatatctcaaacataaccagttcccgtgtcacatctgtaaatgac
atactaaaagtgggtgaagaagtgaaagttcttgtggtaaagtcaatgtttccagacaaa
attgcccttagcattgcagaccttgaaagtgagcctggattatttcttttggacaaagag
aaagtatttactgaggctgagaagatggcaaaaatgtacaggcaaaagcttccagttatt
tctgcgacacgtaattcagatccccttctgaaggatgcacttccctttgatgatgaagct
aaatactcaaattggaaatggtttaaatttgagcagcttaatgaggtcgacagtaaggaa
aatactggatcatga
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