Typha angustifolia (narrow-leaf cattail): 140770686
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Entry
140770686 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
140770686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tang03400
]
140770686
DNA repair and recombination proteins [BR:
tang03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
140770686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
T5orf172
Motif
Other DBs
NCBI-GeneID:
140770686
NCBI-ProteinID:
XP_072968038
LinkDB
All DBs
Position
11:complement(join(4188236..4188405,4189360..4189466,4190243..4190553))
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AA seq
195 aa
AA seq
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MTTRTRTRSKPVVSLGSMRKLSTTFRSTKRPNRLPSKSLIPDNNNNNKLAIAASSSALDP
NYGEGRRRRRRSQSELRSRWSVYLIISSRLPKTYVGVTTNFARRLKQHNGELRGGAKASS
AGRPWALACIIRGFKNRSEACEFESKWKNTSRKMPRKEKKECPSNSLLQHREEALNRVKT
SFDCNYLKIEWKSIL
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgagaacgagaacgaggtcgaaacccgtcgtttctcttggttcgatgaggaag
ctctccacaaccttccgatccaccaaaagacccaatcgtctcccttccaaatccctaatc
cccgacaacaacaacaacaacaaattagcaatcgccgcttcctcctccgctctcgacccc
aattacggggaaggaagaagacgaaggcgacgatcccaaagcgaattgagatcgagatgg
tctgtttatttgataatttcttctcgattgccgaagacttacgtcggcgtcaccacaaac
ttcgcccgccgtttgaaacaacataacggtgaactaagaggtggagcaaaagcttcttct
gcaggaaggccttgggctcttgcatgcatcattcgaggatttaagaaccgaagtgaagcc
tgtgagtttgaatcgaaatggaagaacacttccaggaaaatgccacggaaagagaagaaa
gaatgtccctcaaattccttgttgcagcacagggaagaagctctgaacagagtcaaaaca
tcatttgattgtaactacttaaagatcgaatggaaatcgatcttatga
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