Typha angustifolia (narrow-leaf cattail): 140770831
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Entry
140770831 CDS
T11061
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG4-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140770831
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140770831
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140770831
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
Prok-RING_4
zf-RING_5
vWA-TerF-like
zf-C3HC4
zf-Di19
zf-RING_2
zf-C3HC4_2
Sina_RING
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
140770831
NCBI-ProteinID:
XP_072968224
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All DBs
Position
11:complement(join(3351809..3351895,3352002..3352058,3352143..3352263,3352346..3352473,3352569..3352674,3352924..3353003,3353085..3353182,3353823..3353936,3354021..3354161,3354264..3354348,3355671..3355856))
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AA seq
400 aa
AA seq
DB search
MGNAIGDLFRPRRAGRRSGRPPSVLRPLATQQSIGRINGDYRRRMLTRKYAYIPDNYSSL
EQVTATLRELGLESSNLILGIDFTKSNEWSGKISFNNQSLHSISDRPNPYEQAITIVGKA
LAPFDEDNLIPSFGFGDVTTHDQKVFAFHPDNTPCHGFEEVLACYRKILPNLKLSGPTSF
APIVEAAVDIVERSGGQYHVLVIIADGQVTRSVETKDGELSPQEKRTVDSIVMASAYPLS
IVLVGVGDGPWDDMQKFDDKIPARDFDNFQFVNYTAIMERTASPEQKEAAFALAALMEIP
IQYKAIVELGLLGHVTGKARRVVSLPPPIPYANRQQSLRAEDRSSHSGDEQNQVCPICLT
NRKDLAFGCGHMCCRECGQNLSRCPICRAAITSRLRVFPG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatgcgattggtgacctgttccgcccccggcgagcaggacgtagatccgggagg
ccgccgtcggtgctgaggccccttgcaactcaacaatctataggcagaataaatggcgat
taccggagaaggatgttgacaagaaaatatgcatacatccctgacaactattcctcacta
gaacaagttacagcaaccttgagggaactaggcctggaatcatcaaatcttatactcggc
attgattttaccaaaagcaatgagtggtcaggaaagatttcatttaataatcagagtttg
cactcaattagtgacagacccaatccttatgagcaagccattacaatagttgggaaggct
ttggctccattcgatgaagacaatttgattcctagttttggttttggtgacgtgaccact
catgaccaaaaggtgtttgccttccaccctgacaacacgccttgccatggctttgaagaa
gtattggcttgttataggaagatcctcccaaacttgaaactatcagggcctacttctttc
gcacctatagtggaggcggctgttgacattgttgaaagaagtggaggccaatatcacgta
ttggtcataattgctgatggacaggtaacgcgaagtgttgaaacaaaagatggagagctc
agccctcaagaaaagagaacagttgattcaatagtcatggcaagtgcttacccactgtca
atagtgcttgttggagttggcgatggaccttgggatgacatgcagaaatttgatgacaaa
attccggcacgcgatttcgataattttcagttcgttaactatactgctatcatggagaga
actgcaagcccagaacagaaggaagccgcatttgctcttgctgctctcatggagatacca
attcagtacaaagccatagtggagctaggccttcttgggcatgtaactgggaaggccaga
agagtagtatctcttcctcctcccataccttatgctaatagacagcaatcattaagggca
gaagaccgatcctcgcactcaggtgatgagcaaaaccaggtttgcccaatttgtttgacc
aataggaaagatttggcctttggttgtggtcatatgtgttgcagagaatgtggacagaac
ttatccagatgccccatatgccgagcagctataacatcgcgtttaagggtatttcctgga
tga
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