Typha angustifolia (narrow-leaf cattail): 140770846
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Entry
140770846 CDS
T11061
Name
(RefSeq) homeobox-leucine zipper protein ROC2-like
KO
K09338
homeobox-leucine zipper protein
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tang03000
]
140770846
Transcription factors [BR:
tang03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
140770846
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
DciA_cyano_C
HTH_Tnp_1
Motif
Other DBs
NCBI-GeneID:
140770846
NCBI-ProteinID:
XP_072968255
LinkDB
All DBs
Position
11:join(3257505..3257606,3258134..3258381,3258469..3258586,3258723..3258911,3259076..3259489,3259575..3259676,3260119..3260319,3260465..3260639,3260726..3260997,3261094..3261189,3261278..3261655)
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AA seq
764 aa
AA seq
DB search
MPAGIMISARNMSSMMGRNNGAAGYGSSPLSLGQPNILEGQQLQLQHQQHQHQLVEMPQT
TAAAESEMVRALEGEFESKSGSDNIEGASGDEQDLNQRPRKKRYHRHTQHQIQELEAFFK
ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENSQLRAENEKLRSENMR
YKEVLSNTSCPNCGGPTALGEMSFDEHHLRIENARLREEIDRISGIAAKYLPNPITNRSA
LDHGVGGFSVQSSIESDVFGAGDLLRSVSGQAEIEKPVVIELAVAAMEELIRMAQLGEPL
WNPSPDNSTEDLNEEEYVRTFPRGIGPRPFGLKSEASRETAVVIMNHVNLVEILMDGNQW
STAFSSIVSRATTLEVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRESLFARYCKQHGDG
TWAVVDVSLDSLRPTPVARCRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRSVHTIYKPLV
NSGLAFGAKRWVCTLDRQCERLASVMATNIPSGEIGVITTPEGRKSMLKLAERMVISFCG
GVTASTTHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVSPKRVFDFLR
DESTRSEWDILSNGGVVQEMAHIANGRDHGNCVSLLRVNSTNSNQSNMLILQESCTDPTG
SYVIYAPVDVIAMNVVLNGGDPDYVALLPSGFAILPDGPSGLQGGGGVGDVGSGGGSLLT
VAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVTGESAG
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagggatcatgatatcggcaagaaatatgtcgtcgatgatggggagaaacaac
ggcgccgcagggtacggctcctccccgctttcccttggacagccaaacatactagaaggc
caacaactccaactgcaacaccagcagcaccagcaccagctagtggagatgccgcaaacg
acggcggcggccgagagcgagatggttcgagccctagagggcgaattcgagagcaagtca
ggaagcgacaatatcgagggcgcctccggcgacgagcaagaccttaaccagcggccgcgg
aagaagcgttatcaccgccacacgcagcaccaaatccaagagctggaagctttcttcaag
gaatgccctcacccagacgacaagcagaggaaggagcttagccgggagctcggattagag
cctctccaagtcaagttctggtttcaaaacaaacgtactcaaatgaagactcagcacgag
cggcacgagaacagtcaactccgagcagagaacgagaagctccgatccgagaacatgagg
tacaaggaggtccttagcaacacctcgtgccccaactgcggcggccccaccgccctcggc
gagatgtccttcgacgaacaccaccttagaatcgagaatgctcgcttaagggaagagatc
gataggatatctgggatcgccgcaaaatacctcccgaatccgattactaaccgctcggcg
ctagaccacggcgttggaggcttcagcgtccagtccagtatcgaaagcgacgtgttcgga
gccggggatctgctgaggagcgtgtcaggccaggcggagatcgaaaagccagtggtgatc
gagctggccgtggccgccatggaggagctcatcaggatggcccagcttggggagccgctg
tggaatccgagccccgataactccacggaggacttgaacgaggaggagtatgtacggacg
ttcccgagagggatcgggccgaggccgttcggcctgaaatcggaggcgtcgcgcgagacg
gcggtagtcataatgaatcatgtcaatcttgttgagatactaatggacgggaaccagtgg
agcacagcgttctctagcatcgtgtcaagagctactacattggaagttctatcaacagga
gttgcaggcaactataatggagctttgcaagtgatgtcagcagaattccaagtaccttcc
cctcttgttcctactagagagagcttgtttgcgaggtactgcaaacaacatggagatgga
acctgggcagtagttgatgtttccttggatagtttacgccctaccccagtagcaagatgc
aggaggaggccatcaggctgcttaattcaagaaatgccaaatggttactctaaggttatt
tgggttgagcatgttgaagtagacgataggtcagtgcacaccatatacaagcccttagta
aactcaggcctagcattcggtgcaaagcgatgggtctgtactttggatcgccaatgcgag
cgtctcgcaagcgttatggcaactaacatcccctcaggagaaatcggtgttataacaact
ccagaaggaagaaagagcatgctgaagctggcggaaaggatggttataagcttctgcggc
ggcgtgacggcctcgacgacacatcaatggactactttatccggcagcggcgcagaggac
gtgcgagtgatgactcggaagagcgtcgacgatcccggtaggcctcccggtatcgtcctc
aatgccgccacttccttctggcttcctgtctcgcccaagagggtcttcgacttcctccga
gatgagagcactcgcagtgagtgggatatcctctccaatggtggtgtagttcaggaaatg
gctcacattgctaacggccgagatcacggcaattgtgtctctctccttcgtgtcaatagt
acaaactcgaaccagagcaacatgctaatacttcaagagagctgcactgatcccactggc
tcctacgtcatatatgcgccggtggatgtcatagccatgaatgtcgtgctcaacggcggc
gacccagactacgtcgcgctcctgccctcaggcttcgccatcctccccgacgggccctct
ggactgcaaggtggaggaggggtaggagacgttggctccggcggcgggtctcttctgacg
gtcgcgttccagatcttagtcgactcggtcccgaccgcaaagctatccctcgggtcggtc
gcgacggttaatagtctcattgcgtgcacagttgagaggatcaaggccgcagtcaccgga
gaaagtgccggttga
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