Typha angustifolia (narrow-leaf cattail): 140770883
Help
Entry
140770883 CDS
T11061
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140770883
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140770883
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140770883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf_RING_Vps8
zf-RING_16
zf-RING_UBOX
zf_RING_Vps8_fungal
PHD_NSD
Prok-RING_4
zf-RING_Vps41
Prok-RING_1
zinc_ribbon_16
zf-C3H2C3
PHD
DUF1272
Motif
Other DBs
NCBI-GeneID:
140770883
NCBI-ProteinID:
XP_072968307
LinkDB
All DBs
Position
2:join(7171487..7171690,7171806..7172109,7172197..7172252,7173690..7173731,7173817..7173938,7174029..7174137,7177504..7177557)
Genome browser
AA seq
296 aa
AA seq
DB search
MENAKEGGDGDKPTDVNPDPNSTSPTGDAAVPPADSAAAAPPPPPRTPFTSLSQVDADLA
LARALQEQERAYMMLRLNNGEGSDYGSSEVGSYEYEEGDDLDHDHDHDHPIGDGGSIEGS
DYGEDAFDANDPDVDLGEFDDDEAFARALQDVEEREVAVRLMALAGLNDWRAEVDDEDYG
DNSQVNEQDGWQEVDPDEYSYEELVALGEVVGIENRGLSADTIASLPSITYKTPEVQDGN
TDQCVICRMEYEEGDSLVVLSCKHTYHPECINKWLKINKVCPMCSTEVSTSENKQE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcgaaggaaggcggcgatggcgataagcccaccgatgtgaaccccgaccct
aattcaacctcccccaccggagatgccgccgtccccccggctgattcggccgcggcggcg
cctcctcctccgcctcgcacgccgttcaccagcctgagccaggtcgacgccgacctcgcc
ctcgccagggccctccaagaacaggagagggcttacatgatgttaaggttaaacaacggg
gaaggaagcgattacgggagctccgaggtcgggagctacgagtacgaggagggagacgat
ctcgatcatgatcatgatcacgatcaccctatcggggacggggggagcatcgagggaagc
gattatggcgaagatgcgtttgatgccaacgatccggacgtcgatcttggggaattcgac
gatgatgaggcgtttgcgagggcgctgcaggatgtcgaggagcgggaggtggctgtccgc
ttgatggcacttgccggactgaacgattggcgggctgaggtggacgatgaggactatggc
gataattctcaggttaatgagcaggatggatggcaagaagttgatcccgatgaatattcg
tatgaggagttggttgcattgggtgaagtagttgggattgagaatagaggcctctctgct
gatacaattgcgtctttgccttcaatcacttacaaaacaccagaggtgcaagatggcaac
actgatcaatgtgttatttgccggatggaatatgaggagggcgactctttagttgtgctt
tcttgcaaacacacgtaccaccctgaatgcataaacaagtggcttaaaataaacaaggtg
tgccctatgtgcagtactgaggtttctacctcagagaataaacaggagtga
DBGET
integrated database retrieval system
