Typha angustifolia (narrow-leaf cattail): 140770961
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Entry
140770961 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140770961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140770961
Spliceosome [BR:
tang03041
]
Complex B
Other components
RES complex
140770961
Complex C
140770961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bud13
Motif
Other DBs
NCBI-GeneID:
140770961
NCBI-ProteinID:
XP_072968401
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All DBs
Position
11:complement(join(11683961..11684046,11685299..11685479,11685563..11685635,11685794..11685906,11689411..11689463,11689591..11689655,11689779..11690691,11690767..11690965))
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AA seq
560 aa
AA seq
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MASTGASLKEYLKRYQSGAEDPNKAKKKKRKKEKPKSDSRGGVLVVDEDPVWQKPVQIEE
EESDSAGEELPQVDEDIEVKRMKRLEAIRARKPYHSIADDGSGWVPISEPAKPSDVAGGP
YPSPPRQQRARYDTPSPELEREPSDAERGDLSPPRQPRRRLDTPSPERGEKGANLGDDEV
GDMSPPRKSHKRIRIRSKEDLSPPHHVDGRHKSEKPADLSPPRRSRARRSPEDERPGRSS
ASGLSPPRRSRARPSLEDERPGRSSTADLSPPRRSRAHHSPDGKPGRPSAADLSPPRRSQ
KGLSDDLSPPRRPHRNSTEITNPQISSEDLSPPRKGRKEAYLVKGAPRSGLFSAQEIKEE
INKKKKQEKSRFAAMDPSMTGKDAEPVFRDKEGKRISKEEITKEKEEKPKFRSHDKLEWG
KGLAQKREVEAKALELELEKDKPFARTRDDPDLDKMLKERVRWGDPMAHLVKRKSSEPVL
EDLGDNEKMKDSGFIIPQTIPSHSWLKRGIDCPPNRYGIRPGRHWDGVDRSSGYEKEMFK
RQNEKRATEQEAYLWSVSDM
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaccggcgcttccctcaaagagtacctgaagcgataccaatccggcgccgag
gacccgaacaaggcgaagaagaagaagaggaagaaggagaagcccaaatccgattctagg
ggaggcgtcctcgtcgtcgacgaagatcccgtgtggcaaaaacccgtccagatcgaggaa
gaggaatccgattccgctggggaggaattaccccaggttgatgaggatatagaggtcaag
cgcatgaagaggctcgaagccatccgtgctcggaagccctatcactccatcgctgatgac
ggaagtggttgggtgccaatttcggagccggcaaagccttcggatgtggcaggggggcct
tatccgtccccgccgcggcagcaacgcgcccggtacgacacgccatctccagagcttgag
cgggagccgtcggacgctgaaagaggcgacctttctccgccacggcagccccggaggcgc
cttgacacgccttcaccggagcgtggagagaagggagctaatttgggtgacgatgaagtg
ggtgatatgtcccctcctcggaagtctcacaagcgcatcagaattaggtcgaaagaagac
ctctctcctccccatcatgtggatggtcgtcataaatcggagaagcctgctgacctgtct
cctccaaggagaagtcgtgctcggcgttcgcctgaagatgaaagaccaggtcggtcttct
gcttctggcctttctcctcctaggagaagtcgagctcgtccatcgcttgaggatgaaagg
ccaggtcggtcttctactgctgatctttctcctccgaggagaagtcgtgctcatcattcg
cctgatggaaaaccaggtcggccttctgctgctgacctttctcctcctaggagaagtcaa
aagggcttgtccgatgatctctctccaccgcgtcgacctcatcgcaattcgacagagata
acgaatccccagatttcctctgaggacctttctcctccgagaaaggggagaaaggaggca
tatttagtcaagggggcaccgaggtcaggactattttcagctcaagaaatcaaggaagag
ataaataagaagaaaaagcaggagaaatctagatttgctgccatggatccgtccatgact
gggaaagatgccgagccagtatttagggataaggaaggaaaacgcatatcaaaggaggag
ataacaaaagaaaaagaagagaagccaaagttccgtagccacgacaaattggagtggggt
aaaggcctagcacagaagagagaagttgaggctaaagcactagagctagagcttgagaag
gataagccttttgcacgaacgagggatgatcctgatcttgacaaaatgttaaaagagagg
gttagatggggtgaccctatggcacatcttgtcaagcggaagtcttcagagcctgtttta
gaagatttaggtgacaatgagaagatgaaagactctggctttataattcctcagactatt
ccaagtcatagctggcttaaacggggaatagattgccctccaaatcgatatggtataaga
cctggccgccattgggatggagtagatcgcagtagtggatatgagaaggaaatgtttaag
agacaaaacgagaaacgagcaacagagcaagaagcctatctatggtctgtctctgacatg
tga
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