Typha angustifolia (narrow-leaf cattail): 140770992
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Entry
140770992 CDS
T11061
Name
(RefSeq) ABC transporter F family member 1-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tang03009
]
140770992
Ribosome biogenesis [BR:
tang03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
140770992
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_14
MMR_HSR1
AAA_23
RsgA_GTPase
AAA_28
AAA_15
AAA_27
AAA_24
AAA_22
AAA_30
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
140770992
NCBI-ProteinID:
XP_072968437
LinkDB
All DBs
Position
11:join(13749119..13749313,13749803..13749876,13749954..13750164,13750254..13750488,13750938..13751995)
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AA seq
590 aa
AA seq
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MVSDASKKKAAAKKAAAAAKRGGKSSSTSSAVAAEKVSNGVGSLRISDRTCTGVLASHPL
SRDIHIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPDHM
DIFHLTREIEASDMSALKAVINCDEERLKLEKEAEKLAAEEDGGGETLERIYERLEAIDA
STAEKRAAEILYGLGFNKQMQAKKTQDFSGGWRMRISLARALFMNPTILLLDEPTNHLDL
EACVWLEETLKKFDRILVVVSHSQDFLNGVCTNIIHMQNKKLKLYTGNYDQYVQTRSELE
ENQMKLYKWEQEQIASMKGYIARFGHGSAKLARQAQSKEKTLAKMEQGGLTEKVAKDRIL
VFRFVDVGKLPPPVLQFVEVTFGYTPDNILYRNLDFGVDLDSRIALVGPNGAGKSTLLKL
MTGDLIPLDGMVRRHNHLRIAQFHQHLAEKLDLEMSALQYMIKEYPGNEEEKMRAAIGKF
GLSGKAQIMPMKNLSDGQRSRVIFAWLAWRQPHMLLLDEPTNHLDIETIDSLAEALNEWD
GGLVLVSHDFRLINQVAQEIWVCENQTVTRWQGDIMGFKEHLRSRAGLSD
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggtttcggacgcgagcaagaagaaggcggcagcaaagaaggcggcggcggctgctaag
aggggagggaagtcgtcttcgacttcttccgcggtggcggcggagaaggtctctaatggg
gtcggatcgctccggatttcggatcggacttgcacgggagttctcgcctcccatcctctg
tcgagagatatccatatagagtctctatcattaacctttcatgggcatgacctcatagta
gattcggaactggagctcaactatgggagacgatatggtcttcttgggttaaacggctgt
gggaagtccaccctccttacagcaataggatgcagagagctcccaattcctgaccacatg
gatattttccaccttactcgggagattgaagcttctgacatgtctgcactgaaggcagtc
atcaactgtgatgaagaaaggctgaagttggaaaaagaggccgagaaattagcagctgag
gaagatggtggtggagaaacgttggaacggatatatgagaggttggaagcaattgatgca
tcaactgctgagaagcgtgcagctgaaattttgtatggacttggctttaataagcaaatg
caagcaaaaaaaactcaagatttctctggtggttggcgtatgaggatctcattagcaaga
gcactcttcatgaacccgacaatcctcttacttgacgagcctacaaatcatcttgatctt
gaagcatgtgtctggttggaagagactctgaagaagtttgatcgtattcttgttgttgta
tcgcactctcaggattttcttaatggtgtctgtaccaacatcatccatatgcagaacaag
aagctcaagctctacacaggtaactacgaccaatatgtccagacacgatcggagctggaa
gaaaatcagatgaagctgtataagtgggagcaagaacagattgcttcaatgaaggggtac
attgcccgttttggtcatggctctgcaaagctggcacgccaggcccagagcaaagagaag
accctcgctaagatggagcagggaggactgaccgaaaaggtggcaaaggacaggatatta
gttttccgctttgtggatgtcggaaaactcccacctcctgtgctgcagtttgtcgaagtc
accttcggttacactcctgacaacattctatacaggaatcttgactttggggttgactta
gactccagaattgcattagttggacctaacggcgctggaaagagcacactgctcaagctt
atgactggtgacctgatccccttagatggcatggtcagacggcataatcacctcaggatt
gctcagttccatcagcatctggctgagaagcttgatctggagatgtcggctctccagtac
atgataaaggaatacccaggaaatgaggaggagaagatgagggcggcaattggaaaattc
ggtctctcaggtaaggcgcagattatgccgatgaagaacctatcagacgggcaacggagt
cgggtaatttttgcttggctggcgtggaggcagccacacatgcttctgcttgatgagcca
acaaaccatctggatattgagaccattgattccctggcagaagcactgaatgagtgggat
ggaggtttggttttggtcagtcatgacttcagattaattaatcaggtggcacaagagatt
tgggtgtgtgagaatcaaactgtcactaggtggcagggtgatatcatgggcttcaaggag
catctgaggagcagagctggattatctgattga
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