KEGG   Typha angustifolia (narrow-leaf cattail): 140771173
Entry
140771173         CDS       T11061                                 
Name
(RefSeq) CLIP-associated protein-like isoform X1
  KO
K16578  CLIP-associating protein 1/2
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tang03036]
    140771173
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tang04812]
    140771173
Chromosome and associated proteins [BR:tang03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     140771173
Cytoskeleton proteins [BR:tang04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     CLIP-associating proteins
      140771173
SSDB
Motif
Pfam: CLASP_N CEP104-like_TOG HEAT_EF3_N HEAT INTS1_R4 Cnd1 Adaptin_N XMAP215_CLASP_TOG TOR1L1_N Sec7-like_HUS HEAT_2 HEAT_DAAF5 MMS19_C UTP20 Sec7-like_HDS
Other DBs
NCBI-GeneID: 140771173
NCBI-ProteinID: XP_072968710
LinkDB
Position
11:join(13555193..13555268,13557264..13557425,13558345..13558442,13559075..13559149,13559232..13559300,13559369..13559454,13559547..13559664,13561594..13561692,13561778..13562072,13562248..13563941,13564062..13564154,13564925..13565029,13565140..13565214,13565285..13565353,13565449..13565517,13565702..13565803,13569281..13569439)
AA seq 1147 aa
MELLYVNQRNMLIAKSDQKKVSHLGGESKISKKPIEPMKVYSEKVLIREIDKVASMLAPD
KEWSVRIKAMQRFESLVLGGAADYPSFSALLKQLVTPFMTQLLDRRSSVVKQACHLLSFL
SKELSRNFEACAEIFIPVLFKLVVITVTVISEPADSCIKMMLRHCKVARILPRIADCAKN
ERSAVLRARCCEYALLMLEYWADAPEIQRSADLYDELIRCCVADATSEVRSIARTCYRIF
AKIWPERARQLFSSLDPARQKIIDNEDGGRHKTDPLSVCGGIQLVEVLSHGPTPNFPGRG
TTSLVAKDESTSITSGTFISSGGMSLSQTKSSSRGPDMNSKSLLPASKEEAFAFESSPKG
VDSLSDCDSPSPLAIPATSISLCNSGSSGTTTSTIVKGVVTNDVPNMAEFPSPQLQALGD
VTELPYVSTLLPDFLPTSPLAYTSKSHESSPKPTSIEGTLDIRPSKKLTMQVEKQHIHKD
NVHRDSQNNHIPNFQRPLLRKQMTSWFLASGRNNIDDRQLMLGEMAAHIDVPSSLSEALT
EALNPRSDWITRIFAFDLLRSVLQQGPKGIQEVTQSFEKVMKLFSLHLDDPHYRVAQAAL
STLVEIIPVCRKSFQSYLERTLPHIFSRLNDPKELVRQPCSTVLKIVGETYSVESLLPAL
LRSLDEQRHPKTKLAVVEYANSCFSKHVVNNDTYLGNSFIRLWLGKLALLFNDKNVKLKE
SAVAGFISIYSHFDPTSVLSFILGMSVEEQKPLRRTLKQYTSRIEVDIINFLHYKKEKQV
PVHFLDKFDFIGPSFAEGYIGISKKDQSFGRYSADPVSNVGLTKVSVMQQPSPRTGQALS
DQTQQNSNWKEECGSNSDATSCKTLDKGNFNTGRRSWTISPGKTDSISFNGHKENGSDLG
SENQHDTGVLQSDGGASIPQIIHQVCSGNNGNSKHDTLQRLFELLKYSERSVWDKYLHQI
LFALLEMVNDPESSIRELSLSLLIEMLDKQNKAVEDCIETIIGKVLHATKDASMEVVNQA
HRCLTTVVTQYNPLRCLTGITSLLVNEDEKFLMLSIYCLTKLVGRLSKEELMAQLAAFLP
AVLDAFTNQVLDIRKMAVFCLADIYLILGKEFLPYLEDLNNTQLQLVTIYAQRISQAGSI
NTQGSRC
NT seq 3444 nt   +upstreamnt  +downstreamnt
atggaacttttatatgttaatcaaaggaacatgctcatagccaagagcgatcagaagaaa
gtctcacaccttggaggagaaagtaaaattagtaaaaagccaattgaacctatgaaagtc
tactctgagaaagtattgataagggagattgataaagttgcatcaatgttggctcctgat
aaggaatggtcagtccggataaaagcaatgcagagatttgagagtctggtgcttggaggt
gccgcagattatccatcattttcggcgcttctaaagcagcttgtaaccccttttatgact
cagctgttggatcgacgttctagtgttgttaaacaggcgtgccatctattaagtttctta
tcaaaggaactttcacggaattttgaggcttgtgctgagatattcattccggttctcttt
aagctcgttgttataacagttactgtgatttctgaaccagcagacagctgtatcaagatg
atgttgcgccactgcaaggttgctcgtattcttccccgcattgctgattgtgcaaagaat
gagagaagtgcagttcttcgtgctaggtgttgtgaatacgcacttctgatgcttgaatac
tgggctgatgctccagaaatacaacgatcagctgatctgtatgatgaactcataagatgc
tgtgtagcagatgcaacaagcgaggtgcgttcaattgcacggacttgctatcggatattt
gccaaaatttggcctgaacgtgcccgtcaacttttctcatctcttgatccagccagacaa
aagataatagacaatgaagatggtggtaggcacaaaactgatcctctctcagtttgtgga
ggaattcaattagtagaagttctatctcatgggcctaccccaaactttcctggacgagga
actacttcgctagttgcaaaggatgagagtacaagtatcacttctggaacatttatttct
tctggaggaatgtccttgtcacaaaccaagtcatcctcaagaggtcctgatatgaactcc
aaaagccttctccctgcaagtaaagaagaggcttttgcctttgaaagttcaccgaaaggt
gttgactccctatcggattgtgattcaccatctcctcttgctattcctgctacaagcatt
tctttgtgtaattctggttcatctggtacaactacttccaccattgttaaaggtgttgta
acgaatgatgttccaaacatggcagagtttccctctccacaacttcaagctttaggagat
gttactgagttaccttatgtcagtaccctattaccagattttctgcccacttctccattg
gcttatacttcaaaaagtcatgaaagttctccaaagccaacttctattgaaggaaccctt
gacatcagaccgagtaagaaacttaccatgcaggttgagaagcaacatattcacaaggat
aatgtccatagagattcacagaacaatcatattcctaacttccagcgcccgctcttaaga
aagcagatgactagctggtttctagcaagtggcagaaacaatatagatgataggcaactc
atgttgggtgaaatggctgctcatattgatgttccatcatctcttagtgaggcacttact
gaagctcttaaccccagatcagattggataacgaggatttttgctttcgatcttctccgg
tcagtgttgcagcaaggaccaaaaggtatacaagaagttacacaaagttttgagaaggtc
atgaagctcttttccctgcacttggatgatcctcattatagagtagcacaagctgctctg
tcaacactcgttgagattattccagtttgcaggaagtcttttcaaagttatcttgaaagg
accttacctcatattttctctcggttaaacgacccaaaggaattggtcaggcaaccatgt
tcaacagtcttgaaaattgttggtgagacttatagtgtcgaatctctattacctgccctt
ctccgttccctggatgaacaaaggcatcctaagacaaaactagctgttgttgagtatgca
aatagctgcttcagtaaacatgtggtaaataatgatacttatcttggtaacagcttcatt
agactatggcttggtaagcttgcacttctattcaatgacaagaatgttaaattgaaagaa
tcagctgtggctggcttcatatcaatttactctcactttgatcctacatctgttttaagt
tttatacttggtatgtcagttgaagaacagaaaccactgagacgcacgcttaagcagtat
acctctaggatagaggttgatataataaatttcctgcattataagaaagagaagcaagtc
ccagtacacttcttggacaagtttgatttcattggaccatcttttgctgaaggttatatt
ggaatatcaaagaaagatcaatcttttggtaggtattcagctgatccagtcagtaatgtt
ggcttgacgaaggtaagtgtcatgcagcaaccttccccaagaactggtcaggctttatcc
gaccaaactcaacaaaattcaaactggaaagaagaatgtggctctaatagtgatgctact
agttgcaaaacgttggacaagggcaatttcaacacaggtagaaggtcatggacaatttcc
cctggaaaaactgattcgattagcttcaatggacataaagaaaatggatcagacctaggt
agtgaaaaccagcatgatacaggtgttctacaatcagatggtggagccagcattccccaa
attattcatcaggtctgtagtgggaataatgggaattcaaagcatgacacactacaacga
ttgttcgaacttttaaaatacagtgagcgttctgtttgggacaagtacttgcaccaaatt
ttatttgcattgctcgagatggtcaacgatccagaatcatccattagagagctctctctt
tctttgttgattgagatgcttgataaacagaacaaggccgtggaagattgtattgagact
atcattggaaaagtgcttcatgcaactaaagatgcttccatggaggttgtaaatcaagct
cacagatgcttgactactgtggtaacacagtataatcctttgagatgtctaacgggtatt
acatctttattggtgaatgaggatgaaaagtttcttatgctcagcatctattgtttgacg
aagcttgtaggtcggctttcaaaggaggagctgatggctcaattagccgcatttctacct
gcagttttagatgcttttaccaatcaagttctggatattcgcaagatggcggtgttctgt
ttggctgatatttaccttattctaggcaaagaattcctaccatacttggaggatcttaat
aacacacagctgcagctagtaacaatttatgcccaacggatttctcaagcaggcagcatc
aatactcaaggcagtagatgctaa

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