Typha angustifolia (narrow-leaf cattail): 140771415
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Entry
140771415 CDS
T11061
Name
(RefSeq) syntaxin-52-like
KO
K08503
syntaxin of plants SYP5
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
140771415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140771415
Membrane trafficking [BR:
tang04131
]
SNARE
SNAP-25[C] (Qc)
STX8
140771415
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
DUF5345
XhlA
DUF745
DUF2730
SPAM
SKA1
Laminin_II
Motif
Other DBs
NCBI-GeneID:
140771415
NCBI-ProteinID:
XP_072969053
LinkDB
All DBs
Position
11:complement(join(3370168..3370299,3370889..3370933,3371023..3371123,3371200..3371303,3371541..3371642,3372589..3372806))
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AA seq
233 aa
AA seq
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MASSSDSWMREFSEASRLADDISAMIAERGSFPPSGSDTQRHTSAIRRKITILATRLDSL
ENLLSKLPKLQPISDKELHKKQDMLSNLRSKSKQMASTLNMSNFANREDLLGQSKKAADE
INRIAGLDNHGVVGLQRQIMREQDDGLEKLEETVLSTKHIALAVNEELDLHTRLIDNLDQ
HVEVTDSRLQRMQKRLAILNKRTKGGCSCMCLLLSVVAIVILAAIVWALIKYL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctcttcagattcatggatgagggagttcagtgaagcctcaaggcttgctgat
gatattagtgccatgatcgctgaaagaggatcttttccaccatcaggctcagatacccag
cgccatacatctgcaatccggaggaagataacaattcttgcaaccagattggatagcttg
gagaaccttctgtccaaactcccaaagttgcagccaatatcggacaaggagttgcataaa
aaacaagatatgctttcaaatttgaggtctaaatcaaaacagatggcctcaacactaaac
atgtccaactttgctaacagggaggacttacttggacagagtaaaaaggcggcagatgaa
ataaatagaattgcaggattggacaaccatggtgttgttggactacagaggcagatcatg
agagagcaagatgatggccttgagaagttggaggagacagtactgagcacaaaacatatt
gcattagctgttaatgaagagttggatctgcatactcgattgatagataacttggatcag
catgtggaggtgacagactcacgccttcagcggatgcaaaagaggctggcaattctaaac
aagcgtacaaagggcggttgttcgtgcatgtgtctgctattatctgttgtcgccatagtg
attctggctgctatagtttgggctctcatcaagtacttgtaa
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