Typha angustifolia (narrow-leaf cattail): 140771478
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Entry
140771478 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140771478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140771478
Spliceosome [BR:
tang03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
140771478
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Pinin_SDK_memA
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
140771478
NCBI-ProteinID:
XP_072969156
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All DBs
Position
11:join(14813331..14813675,14815433..14815677,14816400..14816484,14816919..14817104,14817205..14817375,14817456..14817671,14818167..14818338,14818424..14818595,14818716..14818809)
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AA seq
561 aa
AA seq
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METPMKRKPQEEPEVEDESLLDQHTKRQRISGEDGEANGGSYLLGLADYKDEEDEDEEEQ
RRTRQVNGRGEEKEEEEEEEEDDEEEEEKRKVRSRRDRQVEVRRDCPYLDTVNRQVLDFD
FEKFCSISLSNLNVYACLVCGKYYQGRGLKSHAYTHSLEAGHHVYINLQTERVYCLPDGY
EINDPSLDDIRHVLNPRFSRHQVLHLDENKQWSRALDGSNYLPGMVGLNNIKETDFVNVT
IQSLMRVTPLRNFFLIPENYQHSKSPLVQRFGELTRKIWHARNFKGQVSPHEFLQAVMKA
SDKRFQIGVQSDPVEFISWLLNTMHAKLRSSKKKNRSIIHDCFQGELEVVKEIHRKPGME
KKENGDEQSNVAVTEGGLTNDNIVTETSKVPFLMLGLDLPPPPLFKDAMEKNIIPQVPLF
NILKKFDGETITEVVRPCIARMRYRVTKLPKYIILHMRRFTKNNFFTEKNPTLVNFPVKN
LELKDYIPLPTQKENEKLRSKYDLIANIVHDGKPGEGCYRVFVQRKSEEQWYEMQDLHVT
ETLPQMVALSETYMQIYEQQQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgccgatgaagagaaaaccccaggaagaacctgaggtggaagacgaatccctc
ttagatcagcatacgaagaggcagcggatctctggcgaagacggcgaggcaaatgggggg
tcttatctcctcgggcttgcagactacaaggacgaggaggacgaggatgaggaagaacag
aggagaacgagacaagtgaacggccggggagaggagaaggaagaggaagaggaggaggag
gaggatgatgaggaagaagaagagaagaggaaggtacgctcgagaagggataggcaggtg
gaggtgaggagagattgcccttacctcgacacggttaatcgccaggttttggactttgat
tttgagaagttctgctctatctctctatcaaacttgaatgtatatgcatgtttagtttgt
ggaaagtattatcaaggaagaggtttgaaatctcatgcatatactcacagtctcgaagca
ggccaccatgtgtacatcaatcttcaaacagagagagtttattgccttcctgatggatat
gaaataaatgatccatccctagatgatattcggcatgttttaaatccaagattctcaaga
caccaagttttacatctcgatgaaaataagcaatggtcgagagcactcgatggctccaac
tatctccccggaatggttggtcttaataacatcaaggagactgattttgtcaacgtcaca
atacaatccttaatgagagttactccattaaggaacttctttcttattccagagaattat
caacatagcaagtcccctcttgtgcaacgatttggagaactaactcgcaagatttggcac
gcaaggaacttcaagggacaggtcagtccacatgagtttctgcaggcagttatgaaggct
agtgataagaggtttcaaattggtgtacaatctgatccagtggagtttatatcttggctc
ttgaatacaatgcatgcaaaactgagaagttcaaaaaagaaaaataggagcatcattcat
gactgttttcagggcgaactggaagttgttaaagagatccatagaaaacctggtatggag
aagaaagagaatggcgatgagcagagcaatgtagctgttacagaaggtggattaacgaat
gacaatattgtcacagaaacgtccaaagtgccattcctaatgcttggtcttgacttgccg
cctccacctcttttcaaagatgctatggagaaaaatattattccacaggttccacttttt
aatatattaaagaagtttgatggtgagactattacagaggttgtgcgtccatgcatagcg
aggatgcggtatcgggtgaccaaactgccaaaatatatcattcttcatatgcgacggttt
acaaaaaacaacttcttcacagaaaagaaccctactcttgttaattttcctgtgaagaat
ctggaattgaaggactatataccattacctacacaaaaggaaaatgagaagcttcgctca
aagtatgatcttattgcaaacattgttcatgatggaaaacctggcgaaggatgctataga
gtatttgtgcaacggaaatcagaagagcaatggtatgagatgcaggacctccacgtcact
gaaactcttcctcaaatggtagctctgtcagaaacctacatgcaaatatatgagcaacaa
cagtga
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