KEGG   Typha angustifolia (narrow-leaf cattail): 140771492
Entry
140771492         CDS       T11061                                 
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha isoform X1
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    140771492
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140771492
   03110 Chaperones and folding catalysts [BR:tang03110]
    140771492
   03029 Mitochondrial biogenesis [BR:tang03029]
    140771492
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tang04147]
    140771492
Enzymes [BR:tang01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     140771492
Messenger RNA biogenesis [BR:tang03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     140771492
Chaperones and folding catalysts [BR:tang03110]
 Heat shock proteins
  HSP60 / Chaperonin
   140771492
Mitochondrial biogenesis [BR:tang03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    140771492
Exosome [BR:tang04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   140771492
  Exosomal proteins of other body fluids (saliva and urine)
   140771492
  Exosomal proteins of breast cancer cells
   140771492
  Exosomal proteins of colorectal cancer cells
   140771492
  Exosomal proteins of bladder cancer cells
   140771492
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 140771492
NCBI-ProteinID: XP_072969172
LinkDB
Position
11:complement(join(3602985..3603272,3603912..3604112,3604501..3604751,3605873..3606179,3606252..3606397,3606478..3606685,3606778..3606899,3608765..3608939,3609025..3609087))
AA seq 586 aa
MTVSSVSFSSPFFSPQSFSVNRSSKSKWVRLASRIPSLGRSFTVRAGPKRIAFGDDCRRG
LLAGMDKLADAVSVTLGPKGRNVVIDEQGVPKVINDGVTIARAIELSDSIENIGSMLLQE
VASKTNDSAGDGTTTAIVLAREMIKLGLLAVATGANPVCLRKGIDKAVSELIQVLRNKCI
SVSGKEDIKAIAAISAGNDDFVGDLIAEAIEKIGPDGVISIESSSSIDTIIEVQEGMKID
KGYISPHFITNQDKSLVEFQNAKVLVTDQKVTNIKDIIPLLEKTTQLSVPLLIIAEDVSS
EVLATLVLNKLRGLLNVAAIKCPGFGDGKKALLQDIALMTGADFLASDLGLTLHGVTSDQ
LGIAQKITITSNSTTIVADPSMKAEIQARISQIKKDIGETDSAYLSRKLSERVAKLSSGV
AVIKVGAPTEAELEDRKLRVEDAKNATYAAIDEGIAPGGGATLIQLSKHIPMIMDLIDDP
EEKIGAGIVGKALLIPASTIARNAGHDGSAVVEKLLASEWRIGYNAMTDKYEDLLKSGVV
DPCRVSRCALQNAASITGIVLMTQAAMVDKIKEPKPAVPLLPGVTP
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgaccgtctcctccgtctccttctcttcacctttcttctctccccaaagcttctccgtc
aatagaagtagcaaatcgaaatgggttcgcttggcatcacgaattccttctttgggaagg
tcctttacggtgagagcaggcccaaagaggatagctttcggcgatgattgcagaaggggg
ttgttggctgggatggataagctagccgatgctgtttctgttaccttggggccaaaaggg
cgaaatgttgttattgatgagcagggagtacctaaagtaatcaatgatggtgttacaata
gctcgggccattgaactctcagattcaattgaaaatattggttccatgttacttcaagag
gtcgcatccaagacaaatgactctgcaggtgatgggaccaccactgcaattgttttggcc
cgggaaatgatcaagttggggttgttggcagttgctactggggctaacccagtatgtttg
agaaagggcattgataaagctgtcagtgaactgattcaggtcttgaggaacaaatgtatt
tctgtgagtggaaaagaagacataaaagctatagctgcaatatctgctggaaatgatgat
tttgttggggatcttattgctgaagccatagagaaaattggtcctgatggagtaatctct
attgaatcatcctcctctattgatactataattgaagttcaagagggaatgaagatcgac
aaggggtatatatccccacacttcatcacaaaccaggataaatcattagttgagtttcag
aatgcgaaagtacttgtaactgatcaaaaggtgacaaatatcaaagacatcatcccgttg
ttggagaaaaccactcagctaagtgttccgttattaattattgctgaagatgtttcaagt
gaagtgctagctacattggttcttaacaaattgagaggattattaaatgttgcggcaatc
aaatgtcctggttttggagatggaaagaaggctcttctccaggatattgctctgatgaca
ggtgcagattttcttgccagtgacttgggcttgacacttcatggtgttacatctgaccaa
ctaggtattgctcagaagataacaataacaagtaactcaacaacaattgtcgcagacccc
tctatgaaagcagaaattcaggcaagaatttcacaaataaagaaagatattggtgaaact
gatagtgcctacctgtcgaggaagctatctgaaagggttgcaaaactctcaagtggtgta
gccgtgatcaaggtaggggcacccactgaagctgagcttgaggacaggaaacttagagtt
gaggacgcaaagaatgcaacttatgctgccatagatgaaggcatagcgcctggaggtggg
gcgacgctcatacaattgtcaaagcatatccccatgattatggatcttattgatgaccca
gaagaaaagattggggctggcatagttggaaaggcacttcttatacccgcttccaccata
gctcgtaacgcagggcatgatggttcagctgtcgtggagaagcttcttgctagtgaatgg
cggatcggatacaacgcaatgaccgacaaatatgaagacctccttaaatctggtgttgtg
gacccatgtagagtctcaaggtgcgcactccagaatgcagcttctatcactgggattgtt
ctaatgacccaagcagccatggttgataaaataaaggagcccaagcctgcagttcccctt
cttcccggtgttactccatag

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