KEGG   Typha angustifolia (narrow-leaf cattail): 140771496
Entry
140771496         CDS       T11061                                 
Name
(RefSeq) flap endonuclease 1-A-like
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03030  DNA replication
tang03410  Base excision repair
tang03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    140771496
   03410 Base excision repair
    140771496
   03450 Non-homologous end-joining
    140771496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tang03032]
    140771496
   03400 DNA repair and recombination proteins [BR:tang03400]
    140771496
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tang04147]
    140771496
DNA replication proteins [BR:tang03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    140771496
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     140771496
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     140771496
Exosome [BR:tang04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   140771496
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N SGNH
Other DBs
NCBI-GeneID: 140771496
NCBI-ProteinID: XP_072969182
LinkDB
Position
11:complement(join(5308112..5308312,5309620..5309674,5309756..5309802,5309895..5309951,5310043..5310151,5310799..5310880,5311747..5311831,5311908..5312027,5312103..5312153,5312357..5312422,5312954..5313001,5313138..5313186,5313304..5313357,5313470..5313529,5313623..5313681,5313851..5313967,5314048..5314059))
AA seq 423 aa
MGIKGLTKLLADNAPKAMKENKFVSYFGREIAIDASMSIYQFLVVVGRTGTETLTNEAGE
VTSHLQGMFNRTIRLLEAGIKPVYVFDGQPPDLKKQELAKRFSKREDATKDLSIAIEAGD
LEAIEKFSKRTVKVTKKHNEDCKWLLRLMGIPVIEAPCEAEAECAALCKCDKVYAVASED
MDTLTFGAPRFLRHFMVSSSKKVPVMEFEVSKVLEELELTMDQFIDLCILSGCDYCNSIK
GIGGQTALKLIRQHGRMETILENINRERYQIPDDWPYQEARQLFKEPRVSLELPELKWTT
PDEKGLLNFLVTENGFNHNRVTKAIGKIKAAKNKFSQGRLESFSVPVLHASSPPKQKENR
CMLGTARLLPKSRMFTLQICRTSSFNIGRLKLPMAELQFRCHEVLYVGSYFSTGSRETLV
VFK
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgggcatcaagggtttaacgaagctcctcgccgacaacgccccgaaggccatgaaggag
aacaagttcgtgagctactttggccgagagatcgccatcgacgccagcatgagcatctac
cagttccttgttgtggtaggaaggactggaacagagaccctcaccaatgaagctggagaa
gtcacaagtcatttgcagggtatgtttaaccggactataagattgctggaggccggaata
aagccagtatatgtttttgatggccagccacctgatttgaagaaacaagagcttgctaag
aggttctcaaagagggaggatgccaccaaggatctttctatagccatagaggctggagac
ttggaagcaattgaaaagttcagcaaaaggactgtcaaggtcacaaagaaacataatgaa
gactgtaaatggctcctaagattgatgggcattcctgtgattgaggcaccttgtgaagca
gaggcagagtgcgcagcactttgcaagtgtgataaggtatatgctgtggcctcagaagat
atggacacgctaacttttggtgctccaagatttcttcgccactttatggtttcaagttcc
aaaaaagtccctgtgatggaatttgaagtttcaaaggttctagaggagcttgaactcaca
atggatcaattcattgacttatgtattctttctggatgcgactactgcaatagtatcaaa
ggtattggcggacaaacagctttgaagcttatccgtcaacatggtcgcatggaaactata
ttggagaatataaacagagaaaggtatcaaattccagatgactggccttatcaagaagct
cgacaattgttcaaagaacctagggtctctcttgaacttcccgagctgaagtggaccact
ccagatgagaagggtcttcttaacttcctggtcactgaaaatggtttcaatcataatcga
gtgacaaaggcaataggaaagataaaagctgccaagaataaattttcccaagggagactg
gagtccttttctgtaccagttcttcatgcatcttcacctcccaaacagaaggaaaacaga
tgcatgctaggcactgcacgactactacccaagtctaggatgttcaccctacaaatctgt
agaacctcgagctttaacattggtagattgaagctgccgatggcagaattgcagttcaga
tgccatgaagtgctatatgttggttcttatttcagcacaggaagccgagaaacactagtg
gtctttaaataa

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