KEGG   Typha angustifolia (narrow-leaf cattail): 140771661
Entry
140771661         CDS       T11061                                 
Name
(RefSeq) protein RRC1-like
  KO
K12842  U2-associated protein SR140
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140771661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tang03041]
    140771661
Spliceosome [BR:tang03041]
 Complex A
  U2 snRNP components
   U2 related factors
    140771661
 Complex B
    140771661
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3 SAP
Other DBs
NCBI-GeneID: 140771661
NCBI-ProteinID: XP_072969346
LinkDB
Position
12:join(10707792..10707851,10707949..10708084,10708225..10708270,10712270..10712324,10713113..10713265,10713616..10713735,10713827..10713992,10715400..10715512,10715672..10715743,10716351..10716572,10717240..10717298,10717478..10717562,10717726..10717863,10718052..10718276,10718367..10719154,10719257..10719432,10719908..10720170)
AA seq 958 aa
MSSKKVPFHRHREAEEARKKREEDEAARVYAEFVESFKGDSTPGSKAFVRGGVIDPNEKL
KANLEGGKSKDGVSVPKKGSRYVPSFLPPASQGREPEKKKEDEKPKEKEKGKTRAIDKFL
EELKFEQEQREKRNQEREHWRDGRHTENSVPPSRFDELPDEFDPSGKFAGSFDDGDPQTT
NLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAA
KDEMQGVVVYEYELKIGWGKSVSLPAQALPAPPPGHMAIRNKEGGTVIISGPDAAPVTSV
TTQNSELVLTPNVPDIVVVPPEDGHLQHVIDTMALHVLDGGCSFEQAIMERGRGNPLFSF
LFDLRSQEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPSLPPSRSPEHEKESS
TTFAAGRSRRVELERTLTDSQRDEFEDMLRALTLERSQIKEAMGFSLDNADAAGEIVEVL
TESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESFNDLYRSI
TGRITAEALKERVLKVLQVWADWFLFSDAYLNGLRATFLRSSNSGVIPFHSICGDAPEVD
NKTSSDDTNEGVKLNQDGALAMGKAAAMKELLGLPLAELERRCRHNGLSLCGGRNMMVAR
LLSLEEAERERGYERDDMKYAQSQFSRSSRDDNNFNPHNARLREVDIDPDTGLAGSNQYG
QEGIRAYSKPSGSPEHEPDTNDIGKNDPVLVSKWSREDDVSDDEDKKNGRGLGISYSSGS
DTAGDLAKSDDIEVATDNAIHTHPDNILNEEHRQKLRRLEIAVMEYRESLEERGLRSTEE
IEKKVAIYRKRLQSEYGLSDSGDDGNNRCSSERASLERKEKRDDARDSARKRRRSQSRSR
SPQRKLSDRDRHREREKSHETESGRERTREKSGSRERDDYHDKERTRERDKDRRRKGK
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgagttcgaagaaggtcccatttcataggcacagggaggccgaggaggccaggaagaaa
agggaggaggatgaagctgctcgggtctatgcggagttcgtggagtcatttaagggcgac
agcacgcccgggtcgaaggcgttcgttcggggaggggttattgatccgaacgagaagctc
aaggctaatttagaaggtggaaagtccaaagatggtgtatctgttccaaagaagggaagt
aggtatgtcccttccttcttgccacctgcatctcaaggaagagagcctgaaaaaaagaag
gaggatgagaagccaaaggagaaagaaaaggggaagacacgagccattgataaatttttg
gaggagttgaaatttgaacaagagcagcgggagaagcgtaatcaggaacgcgaacattgg
cgtgacgggcgccatactgagaactctgttccaccaagccgttttgatgagctgccagat
gagtttgatccaagtggaaaatttgcaggctcatttgatgacggggatccccagactact
aacttatatgttggcaatctctcaccaaaggtggatgaaaattttcttttgaggacattt
ggtaggtttggtccaatcgccagtgtgaagattatgtggcctcgcacggaggaggaaaga
aggcggcaaaggaattgtggttttgttgcttttatgaatagagcagatggacaagctgcg
aaggatgaaatgcaaggtgtagttgtttacgaatatgaattgaagattggatggggcaaa
tctgtatctcttccagcacaggcactccctgctcctccaccgggacatatggcgatcaga
aataaggagggtggtacagtgattatatctggacctgatgctgcacctgttacatctgtt
acaactcaaaactcagagttggtgcttactccaaatgttccggatatagttgttgttcct
ccagaggatggtcaccttcagcatgtgattgacacaatggctttgcatgttcttgatggt
ggatgctcttttgaacaagctataatggagagaggtcgtggaaatccacttttcagtttt
ttgtttgatctcaggtcacaagagcatacatactatgtttggcggctatattcatttgcc
cagggtgatactcttcagagatggcggacagagcctttcatcatgattacaggcagtggg
agatggattccaccatctcttccacctagcagaagtcctgagcatgagaaagaatctagt
accacctttgcagctggtagaagcaggcgtgttgagttggagcgtacattaacggattca
cagcgagatgaatttgaagatatgctgcgtgctctgacattagagagaagtcagataaaa
gaagctatgggattttccttagataatgctgatgcagctggtgagattgttgaggttctt
acggaatctttgacgcttaaggaaacgcctataccaaccaaggttgcaaggcttatgctc
gtatctgacatccttcataacagtagtgctccagtgaaaaatgcttctgcttaccgtaca
aagtttgaggcaaccctgccagatataatggaaagcttcaatgacttgtaccgcagcata
accggaagaattactgctgaagccttaaaggagcgagttttgaaggtcctacaagtatgg
gcagactggtttcttttttcagatgcatatttgaatggtttgagagctacatttcttcga
tcaagtaactcaggtgttatcccgttccactcaatatgtggggatgcacctgaagttgat
aataaaactagctctgacgataccaatgaaggagttaagcttaatcaagatggtgcctta
gcaatggggaaggcagcagcaatgaaagagctgttagggcttcctcttgctgaacttgaa
aggcgctgcagacacaacggtctatcactatgtggtggaagaaatatgatggttgccagg
ttacttagcttagaggaagcagaacgagagagaggctatgaacgggatgatatgaaatat
gcacaaagccagttttctagaagttcaagagatgacaacaattttaatcctcataatgct
agactaagggaagttgatattgatccagacacaggcttagctggaagtaatcagtatgga
caagaaggaattagagcatattctaaaccctccggttcacctgaacatgagccagataca
aatgatataggaaaaaatgatcctgtcttagtttccaaatggagtcgagaggatgatgtc
agtgatgatgaagataaaaagaatggtcgaggtctgggcataagctattcatctggaagt
gatactgctggtgatcttgcaaagagtgatgatatagaagtagctactgataatgccatt
catactcatcctgataacatattgaatgaggaacatagacagaaattaagacgtcttgag
atagctgtaatggaataccgtgaatctcttgaagagcgaggactccgaagtactgaggaa
attgagaagaaggtggcaatttatcgcaaacgtcttcaatctgaatatggcttatcagat
tctggtgatgatgggaataacaggtgctcatctgaaagggcatctttggagaggaaggag
aaacgtgatgatgctcgtgattccgcaaggaagcgccgtcgtagccaaagccgaagtcgc
agtcctcaaaggaagttgtcagatagagatcgtcatcgtgaaagggagaagtcgcatgag
acagaaagcgggagagagagaactcgcgagaagagtggaagtagagagagggatgattac
catgacaaggaaagaaccagagagagggacaaggataggaggagaaagggaaaataa

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