KEGG   Typha angustifolia (narrow-leaf cattail): 140771683
Entry
140771683         CDS       T11061                                 
Name
(RefSeq) lysine--tRNA ligase, chloroplastic/mitochondrial isoform X1
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    140771683
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:tang01007]
    140771683
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tang03016]
    140771683
Enzymes [BR:tang01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     140771683
Amino acid related enzymes [BR:tang01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   140771683
Transfer RNA biogenesis [BR:tang03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    140771683
 Prokaryotic type
   Other AARSs
    140771683
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d Nucleoporin_N
Other DBs
NCBI-GeneID: 140771683
NCBI-ProteinID: XP_072969389
LinkDB
Position
12:complement(join(2775904..2775996,2779718..2779891,2781510..2781600,2795523..2795617,2797158..2797364,2802595..2802699,2802831..2802923,2805484..2805591,2807491..2807559,2808487..2808544,2810887..2810995,2811359..2811470,2812964..2813176,2819450..2819686))
AA seq 587 aa
MDVLRMWSASSHLIHLASRAVSTTTRTRLRLRVRCCSSSSPAAVTTPSPTVNKGVSDRRR
RSSSSTSDRDSIRAIRLKKVEELRSNGHDPYAYKWDRTHTASQLQDDYSYLGNGEECKEA
SVSLAGRIIARRAFGKLAFLTLRDDTGAIQLYCEKESLTDEQFEQMKSFVDIGDIVGSTG
SVKKTEKGELSVYVRHFEILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADVFRI
RAKIVSEIRKTMESLGFIEVETPVLQGAAGGAEARPFITYHNSLGRDLYLRIATELHLKR
MLVGGLEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYQSMMNMAEEIVTRCALSIH
GKLNINYQGAEISLQRPWRRETMHNLVKEATGIDFNQFSDNIDDAKRVARGVLGIKEEER
NNTLVQACPSLGHVLNEVFEVIVEPNLIQPTFVLDYPIEISPLAKPHRRHKGLTERFELF
VCGREIANAFSELTDPVDQRSRFEEQIKNHNDKRAALAKDSKTADAKSDDDDYSYEVALD
EDFLTSLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKIQQ
NT seq 1764 nt   +upstreamnt  +downstreamnt
atggatgtccttaggatgtggagcgcttcttcccaccttattcacttggcgtccagagcg
gtctccaccaccaccaggacgagattaaggttaagggtgcgatgctgttcctcttcttct
cctgccgccgtcacaacgccgtcgcccaccgtaaacaaaggcgtctctgaccgccgccgc
cggagctcctcctctacttctgatagggactccattcgtgccatccgtctaaaaaaggta
gaagaattgaggagcaatgggcatgatccatatgcttataagtgggacagaactcacact
gcaagtcagctccaagatgattatagctatttgggaaatggtgaagagtgtaaggaagct
tcagtgtcactcgcgggaaggatcattgctcgtagagcatttggtaaactcgccttcttg
acactaagagatgatacaggggcaatccagctttactgcgagaaggaaagccttactgac
gaacagtttgagcagatgaagtcatttgttgatatcggtgatattgtaggttcaactggg
tcagtaaagaagacagaaaaaggggagttatctgtttatgtgaggcattttgaaatcctt
acaaaatctttgctccctctaccggataagtatcatggcctaactgatgtcgacaaacgc
taccgtcaacggtatgttgacatgattgcaaatcctgaggttgctgatgtgtttcgaata
agagctaagatcgtgtctgagatccgcaagacaatggaatctttgggttttatcgaggtt
gagactccagttttacagggagcagctggtggtgcggaagctaggccttttattacttac
cataactcccttggaagagatctttatctgagaattgcaacagagctgcacttgaagaga
atgctggttgggggccttgagaaggtatacgagataggacgcatattccgaaatgaagga
atttctactcgtcataatcctgaatttactactattgagatgtacgaagcatattcagac
tatcaaagcatgatgaacatggctgaggaaattgttacacgttgtgctctgtcgattcat
ggaaagcttaacattaattatcagggagctgagatatctctgcaaagaccatggaggagg
gaaaccatgcataatcttgttaaagaagctactggaatcgattttaatcagttctccgac
aacattgatgatgctaaacgagttgcaagaggggtactgggtattaaagaagaggaaaga
aataatactttagtacaagcatgcccatctctaggacatgttcttaatgaggtttttgag
gtcattgtggagccaaaccttatacaaccaacatttgtccttgactatcctattgagata
tccccacttgccaaaccacacagaaggcacaaaggattgaccgaacggtttgaactattt
gtttgtgggcgtgagattgctaatgctttctctgaacttacagatccagtggatcagagg
agtcgctttgaggagcaaataaagaaccataatgacaagcgtgctgctctagctaaagac
tctaaaacagctgatgcaaaaagtgacgatgatgattactcctatgaagttgctctagat
gaagactttttgacttctttagagtatggcatgcccccggcttcaggaatggggctcggc
attgataggctagtaatgctactaacaaactctgctagtataagggatgtcattgctttc
cctgtcctaaagattcagcaatag

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