Typha angustifolia (narrow-leaf cattail): 140771696
Help
Entry
140771696 CDS
T11061
Name
(RefSeq) probable disease resistance protein At5g63020
KO
K03094
S-phase kinase-associated protein 1
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03083
Polycomb repressive complex
tang04120
Ubiquitin mediated proteolysis
tang04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140771696
04120 Ubiquitin mediated proteolysis
140771696
09126 Chromosome
03083 Polycomb repressive complex
140771696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140771696
04121 Ubiquitin system [BR:
tang04121
]
140771696
03036 Chromosome and associated proteins [BR:
tang03036
]
140771696
Membrane trafficking [BR:
tang04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
140771696
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
140771696
Cul7 complex
140771696
Chromosome and associated proteins [BR:
tang03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
140771696
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
140771696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
LRR_8
LRR_4
LRR_RPS2
WH_DRP
AAA_22
Bac_DnaA
AAA_16
Rx_N
AAA_18
nSTAND3
NACHT
ATPase_2
LRR_Zer-1
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
140771696
NCBI-ProteinID:
XP_072969407
LinkDB
All DBs
Position
12:11228757..11231600
Genome browser
AA seq
947 aa
AA seq
DB search
MEFLKIVADVVLAPLFSFVKRQITYPFKAGDNVRDLQNVLRRLLNKKDDVKEKIEIAERN
GQRQTHQVQEWLDEVEAAKTQVDAMVEKYNQRCLCFNRFSPNCCSNYTIGKTAAKKLLDV
QKLLDYETQEEVAITPVPPPVQEVSVPTTSTSSSFANPNLEEALRCIKEDQEVGMIGIWG
MGGVGKTHLLKQINNSFIGDSAFNQVFFVTASQSCTTETIQKQIVEILNLQQHEDVSRQS
NIIFHFLRNKSFLMLLDDIWGRLELQDVGIPFPLGMVEGCKRKVVLTTRSINVCGKMEVR
KKIKVKCLNDGEAWSLFLEKVGEETISSHPLIPRLAKEVSKELEGLPLALITTGRAMYEK
KDPREWEYAIDLLKKSRLDEVEDQEGSTFCRLKFSYDSLTSDTLRESFLSCSMWPEDWWI
EKEDLIECWMGLGLIKEFDSISEAYNTGHTLITYLIRACLLEEGERIVMAGLSEESERTV
PAVRMHDVLRDMALWITHDEGKNKNKWMVFQHEALRDQQIWSKAERITLMQSDIKALPPI
ATTPCSSKLTTLMLSSNYKLRSLGDKFGALVALTYLNLSSCGFVHFPEEICGLVQLRYLN
LSRNKMPSLPEELGSLINLKFLILRDTGIHTIPHVVIAKLKSLQVLDLFQNWSIGGLAEL
ASTLLEELECLYDLKGLGICVQGKSQFDKLVELPNVPVRWLGISNLENSTSFSLSTSFLG
DKQIQGNLAELCFAKSNATQYIVIEGNHQQPTWQLRALENLYFHKMHGLEEIIWKGVVPK
ELFRALRFLNVVDCDKLKSISWILHLPCLMKLRVIRCSSMRELIADTVEKEEEKEMTSTA
TFPCLREIELEDLPELVSICHSAFALPALENICFRHCLKLKKLPFRPGNISSKLRFIDGS
NVWWEGLDWEDSSVRTSFLPFYKEKIRVDMMVQSAALKFIANNNIII
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggagtttctcaagattgtcgcagacgtcgtcctggctccgttgttcagttttgtgaag
cggcagattacgtatccgtttaaagctggcgacaacgtcagagacctgcaaaacgtcctt
cgacgtttgctcaacaagaaggacgacgtcaaagaaaagatcgagatagctgaaaggaat
ggccagagacaaactcatcaagtacaagagtggttggatgaggtggaagccgccaaaacc
caagtggatgcgatggtagagaaatataaccaaaggtgcttatgcttcaatcgtttctca
cctaattgttgttcaaactacaccatcggcaaaactgccgccaagaagctactggatgtg
caaaagttgttagattatgaaacacaggaggaggtagccataacaccggtgccgcctcct
gtccaggaggtgtctgtgcctaccacatcaacatcatcttcgtttgcaaatccaaatctt
gaagaagcactccgctgcattaaagaggatcaagaggtgggaatgatcgggatttggggc
atgggtggtgtagggaagactcaccttttgaaacaaatcaacaactcctttatcggcgac
tctgcttttaatcaagtgttcttcgtcacagcttctcaatcatgtacaacagaaacaatt
cagaagcagatcgtcgagattctgaacctgcagcaacacgaggatgtgtcgagacaaagt
aacatcatcttccatttcctgaggaacaaaagtttcctcatgcttttggacgacatttgg
gggcgccttgaactgcaggatgttggaatcccatttccgcttgggatggtcgagggatgc
aagcgcaaggtggtgttgacgacgcgatcaataaatgtttgtggcaagatggaagtgaga
aagaagatcaaagtgaagtgtctgaacgatggcgaggcatggagcctcttcctggaaaag
gttggcgaggaaaccatcagctctcatcctctcataccacgccttgcgaaagaagtcagc
aaggagttggagggcttgccactggctcttatcactaccggtcgagctatgtacgagaag
aaggatccaagagaatgggaatatgcaattgacctacttaagaagtcgcgactcgatgaa
gtcgaggatcaagaagggagtactttttgtagattaaagttcagttatgatagcttgacg
tctgacaccttgagagaaagtttcttatcttgctccatgtggcccgaggattggtggatc
gaaaaggaagatctcatcgaatgctggatgggattaggcttaataaaagagtttgactcc
atatcagaagcatataacaccgggcacactctgatcacgtacctcataagagcatgctta
ttagaggagggtgaaagaatagttatggcaggcttatcggaggagagtgaaagaacagtt
cctgcggtgaggatgcatgatgtgttacgcgatatggcattgtggataacacacgacgag
gggaagaacaagaacaaatggatggtctttcaacatgaggctctacgtgaccagcaaatt
tggagtaaagcagaaaggataacgttgatgcagagtgatattaaagcacttcctcctatt
gcaactacaccctgctcatccaaactcaccactttgatgctttcaagtaactataagttg
agatcgcttggagataaattcggagctctagttgcactcacatatcttaacctctcctcg
tgtggatttgttcattttcccgaagagatatgtgggttggtccagctccgatacctcaac
ctttcacgtaataaaatgccgtctctccctgaggagctgggatctcttatcaatctcaag
ttcctgattttacgggataccggaattcatacaatacctcatgttgttattgcaaaactc
aagtctttgcaggttctcgacttatttcaaaattggagtattggtggtttggccgaattg
gcatcaacactgttggaagagctagagtgcttatacgatctaaaaggtcttggaatttgc
gtacaaggtaaatcacaattcgataaactagttgagttgcccaatgtaccagtccggtgg
cttggtataagcaatctagagaattccacttccttctccttgtcgactagcttccttggg
gacaaacaaattcagggaaacttagctgaactttgttttgcgaagagcaatgcgacccag
tacatagtgattgaaggtaaccatcaacaacccacatggcaacttcgagcgcttgagaac
ctctattttcataagatgcacggcttagaagagataatatggaagggagtagttcccaag
gagctgtttcgggctctacgcttcttaaatgtagttgattgtgacaagttgaagagcatt
tcatggattttgcatctcccgtgccttatgaaactacgggtaattcgatgttctagcatg
agggaactaattgcggatacagtagaaaaggaagaagagaaagaaatgacgtcgaccgct
actttcccttgcctcagggagatagagttagaagatctgccagagctggtttccatttgc
cactccgcattcgctctcccggcattagaaaatatttgttttcgacattgtctgaaattg
aagaagctcccattccgaccaggtaacatctcgagcaaattaaggtttattgatggttcc
aacgtatggtgggaaggtttagactgggaagacagcagtgtcagaacttccttcctaccg
ttttacaaagaaaagatacgggtggatatgatggtacaatccgcagctctcaagtttata
gcaaataacaatataataatataa
DBGET
integrated database retrieval system
