Typha angustifolia (narrow-leaf cattail): 140771962
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Entry
140771962 CDS
T11061
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140771962
Spliceosome [BR:
tang03041
]
Complex A
Other components
Complex A specific factors
140771962
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
zf-CCHC
RRM_5
PHD_4
DUF6319
RRM_7
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
140771962
NCBI-ProteinID:
XP_072969916
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Position
12:2250422..2252746
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AA seq
774 aa
AA seq
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MEEFASIETLTPKNNHETLNLGDSYPPYPPQTLGPDCHPPPPPETLDHDCHPPPPPETLG
PRETSQENLVINRPLVSENGQALTHSGGADKDVSGGEDDAGSGRRRRRSRWDPPAESDGG
SGADGSTGGRKRKSRWAEEEPKPALQLPDFMKDFTSDLDPEVQVLNARLLEISRLLQSGM
PLDDRPEGARSPSPEPIYDNMGVRINTREYRARERLNKERQDIISQLIRRNPAFKPPADY
RPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSIKEGKLQQK
RDLKPDPSENEDLHVLVEAETQDALDAAAGMVEKLLTPVDEVLNEHKRQQLRELAALNGT
IRDDEFCRLCGEPGHRQFACPARTTTFKSDVQCKICGDGGHPTIDCPMKGSVKKMDDEYQ
NFLAELGGSAPESLTKQSSAVPLLGSGTSGSNPPWAGGSGVGATAANGIKKEYDETNLYI
GYLPPTLDDDGLIRLFSSFGDIVMAKVIKDRTTGLSKGYGFVKYADMTQANQAIAAMNGY
HLEGRVIAVRVAGKPPQPTVPPGPPVPVAPTYTGSDPSAGGYPSQHYMTGGPLPNPPPPP
PGSYVNAPVPWGAPFPPSYAPYPPPPPPGSSMYTPVQGQQVPPYGMQYQPPPQTVPPGTA
PQNMPSSEAMQNPPTGQPQSSAAPAQPVPANIYGSSVAPNVMPVYPPLPYGYAPYYPAVS
PVPPQTIDPSQSLATAPWATNAPPPPPPPQASSTAEQPTSYGDTEYEKFMSEMK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattcgcttcgatcgaaaccctaaccccgaagaacaaccacgaaaccctaaac
ctaggcgactcgtaccctccctatcctccgcaaaccctaggtcccgattgccatcctccc
ccgccccccgaaaccctagatcacgattgccaccctcccccgccccccgaaaccctaggt
ccgcgggaaacatctcaagaaaacctagttatcaatcgccctctggtgtccgaaaacggc
caggccctcacgcatagtggcggcgccgacaaggacgtctccggtggcgaggacgatgcc
ggaagtggccgccgacgccgtcgaagccggtgggacccgccggctgagtcagatggtgga
tccggcgccgacggctccaccggtggtcgcaagcgcaagtctaggtgggcggaggaggag
ccgaagccggcgcttcagctcccggactttatgaaggatttcacctctgacctggatccg
gaggttcaggtcctcaacgcccgccttctcgagatcagccgccttctgcagtcgggcatg
cccctcgatgaccgccccgagggcgcccgctccccgtcccccgagcccatctacgacaac
atgggcgtccgcatcaacacccgcgagtaccgagcacgtgagcgcctcaacaaagagcgg
caggacatcatctcccagctcatccgccgcaaccctgctttcaagccccctgccgactac
cgtcccccgaagctccagaagaagctctacatccccatgaaggagtaccctggttacaac
ttcatcggtctcatcatcggccctcgtggaaacacccagaagcggatggagaaggagacg
ggcgccaaaatcgtgatccggggcaagggttcgatcaaggaaggcaagctgcagcagaag
cgggacctgaagcctgacccgtcggagaacgaggacttgcatgttctagtggaggctgag
acacaggatgcgctggatgctgccgcggggatggtggaaaagctcttgacgccggtcgat
gaggtattgaacgagcacaagaggcagcagttgagggagcttgcggccctcaatggcacg
ataagggacgatgagttctgtaggctatgcggtgagcctgggcaccggcagttcgcttgc
cctgcccgcactactacttttaagagcgatgtgcagtgtaagatttgcggggatggtggc
catcccacgattgattgccccatgaaaggttcagtcaagaagatggatgacgagtaccag
aacttcttggctgagttaggcggaagtgctccggagtctcttacgaagcagagttcagca
gtgcctcttcttggttcgggcacttcgggaagcaaccctccatgggctggtggtagcgga
gttggggccacagctgccaatggcattaagaaagagtatgatgagacaaatttgtacatc
ggatatctgcctccaactcttgacgacgatggacttatcaggttgttctcatccttcggg
gatattgtgatggccaaggttatcaaggacaggactacagggcttagcaaaggttacggc
tttgtgaagtacgccgacatgactcaggcgaatcaggcgattgctgctatgaatggttat
catctggaagggagagttatagctgtaagagtagctggtaagccaccccagcccactgtg
ccccctggtcctccggttcccgtggcaccaacatacactggttcagatccttcagctggt
ggttatccttctcagcactatatgactggtgggcctcttcctaacccgccaccaccgcct
cctggaagttatgtcaatgcaccggttccttggggggcaccatttccaccttcttatgca
ccgtatcctccaccaccaccgccaggttctagcatgtacacccctgttcaaggccaacaa
gttcctccttacggcatgcagtatcagccaccacctcagactgttccacccggcactgcg
cctcaaaacatgccttccagtgaagcaatgcagaatcctcctactggtcagccacagagt
tctgcagcacctgctcagcctgtgcccgccaacatatatggctcttctgttgctccaaat
gttatgcctgtatatccgccacttccttacggttatgcaccttattatcctgctgtttca
ccagttccacctcagacgattgatccctctcagagccttgcaactgcaccatgggctaca
aatgctcccccgcccccacctcctcctcaggcttcatcaactgcagagcagccaacctct
tatggtgacactgagtatgagaagttcatgtcagagatgaagtga
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