Typha angustifolia (narrow-leaf cattail): 140772308
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Entry
140772308 CDS
T11061
Name
(RefSeq) disease resistance protein RPS5-like
KO
K03094
S-phase kinase-associated protein 1
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03083
Polycomb repressive complex
tang04120
Ubiquitin mediated proteolysis
tang04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140772308
04120 Ubiquitin mediated proteolysis
140772308
09126 Chromosome
03083 Polycomb repressive complex
140772308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140772308
04121 Ubiquitin system [BR:
tang04121
]
140772308
03036 Chromosome and associated proteins [BR:
tang03036
]
140772308
Membrane trafficking [BR:
tang04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
140772308
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
140772308
Cul7 complex
140772308
Chromosome and associated proteins [BR:
tang03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
140772308
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
140772308
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NB-ARC
LRR_14
WHD_DRP
LRR_RPS2
LRR_8
LRR_4
AAA_22
ATPase_2
Herpes_UL52
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
140772308
NCBI-ProteinID:
XP_072970413
LinkDB
All DBs
Position
12:complement(11016725..11019526)
Genome browser
AA seq
933 aa
AA seq
DB search
MELLNSVADLALAPLFNFLMRQLTYPFKAGDNIRALRSASGHLLTKKDDVVEKIEIAERN
GQRPTHQLQRWLDEVEATKTQVDAIVEKYKQSCLCFKCFSPDCCSNYTISKTAAKKLLDV
QRLLNSETTEEVSITPVPPPVQEVPIPTTSTALPNANPNLEEALHYIKEEQVVGMIGIWG
MGGVGKTCLLGQINNSFIGDSSFDVVIFYTASQSYTTRNFQKEIAKSLKLQRDGDVSTQA
HIIFSFLSKRNFLLLLDDIWERIDLQEVGIPFPLGLVGGCKRKVVLTTRSTTVCGQMEVR
KKIKVESLNYQDAWSLFLEKVGEETISSHPRISSLAKDVVKELRGLPLALITTGRAMYEK
KDPREWEHAIDLLKKSQLDKVEKHSPEDLEKGTFYRLKFSYDSLNSDTLRECFLSCSMWP
EDYWIKKEELIECWMGLGLIKEFDSMSEAFNTGYTLIGDLVAACLLEPDQRYGLRVRMHD
VLRDMALWIARDKGKNKNKWMVFQDEAPRDKRIWHQAERITLMLSKIRELPPIASTPSSS
KLTTLMLLRNRELESLGDVRAFVDLTYLNLSDCGFAQFPTEICGLVQLLYLNLTDNSGIR
SLPKELGSLVNLKYLILRSTGIRTIHQGVIAKLKSLQVLDLHKTWGTNSENLTYLPSLLF
QDLECLDNLRGLGICVEDKSQLYRLTELSNVSVRWLVISKLEKSTSLSLSAGFLGEERIQ
MNLAYLRFVNSDVTQVVIEGNHQHPAWHLRALEGLRFEHMHGLEEIIWKGVVPEELFQSL
LFLYIESCVMLKNISWILHLPCLRILYVSLCSNVRQLIAYGAENYDENVSDTAGREEEKE
ITSTSTFPCLNEIYFYDLPEMVSICHSTVNFPALSRMRVKNCPKFKKLPFRSDSIPNKLQ
FIESPKQWWESLEWEGSRIRSSFQPFYKEISEE
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggagcttctcaatagtgttgcagatcttgccctggctcccttgttcaatttcctgatg
cggcagctgacctatccctttaaagccggcgacaacatcagagccctccgaagtgccagc
gggcatttgctcaccaagaaggacgatgtcgtcgagaagatcgagatagcggagaggaat
ggccagagaccaactcatcaactgcaaaggtggttagatgaggtggaagctaccaaaacc
caagtggatgcgatagtagagaaatataagcagagttgcttgtgcttcaaatgcttctct
cccgattgttgttcaaactatactatcagcaaaactgccgccaagaagcttctggatgtg
caaagattattaaacagtgaaacaaccgaggaggtctcaataacaccggtgccgcctcct
gtccaggaggtgcctattcctaccacatcaacagcacttccgaatgcaaatccaaatctt
gaagaagcactccattatattaaagaggaacaagtggtggggatgatcggaatttggggc
atgggtggcgtagggaagacttgcctcctcggacaaatcaacaactcttttattggcgac
tcttcttttgatgttgttatcttctatacggcttctcaatcatatacaacgagaaatttc
caaaaggagatcgccaagagtctgaaactgcagcgagatggggatgtctcgacacaagct
cacattatctttagtttcctgagcaaaagaaactttctcctgctgttggacgacatttgg
gagagaattgatctgcaggaagtgggaattccgtttccactcggcctggtcggtggatgc
aaacgcaaggtggtcttgacgacacgatcaacaactgtttgtggtcaaatggaggtgagg
aagaagatcaaagtagagtctctgaactatcaagacgcatggagcctcttcctggagaag
gttggcgaggaaaccatcagctctcatcctcgaatatcaagtcttgcaaaagatgtggtc
aaggagttgcgcggcttgccactggctcttatcactaccggtcgagctatgtacgagaag
aaggatccaagagaatgggaacatgccattgatctactcaagaaatcgcaactcgacaag
gtcgaaaagcactcgcctgaggatcttgagaaaggtaccttttatagattaaagttcagt
tacgatagcttgaactctgacaccttgagagaatgtttcttgtcttgctccatgtggccc
gaggattattggatcaagaaggaagaactcatcgaatgctggatgggattaggcttaata
aaagagtttgacagcatgtcggaagcttttaacaccggatacactctgatcggtgacttg
gtagcagcctgcttattggaaccagatcagagatatggtttgcgagtgaggatgcatgat
gtattacgtgatatggcattgtggatagcgcgtgacaagggaaagaacaagaacaaatgg
atggtctttcaagatgaggctccacgcgacaaaagaatttggcatcaagcagaaaggata
acgttgatgcttagtaagatacgagaacttcctcctatcgcatctacaccctcttcatcc
aaactcactacattgatgcttttgcgcaaccgggaattggaatcgcttggagatgttcga
gctttcgttgacctcacatatctcaatctctccgactgtggatttgctcaatttcccaca
gagatatgtgggttagtacagctcctttatctcaaccttacagataacagtggcatacga
tcactccctaaggagctaggatctcttgtcaatctcaaatacttgattctaagaagtacc
ggcatccgtacaatacatcaaggggttatcgcgaaactcaaatctttgcaggttctcgac
ttacacaaaacttggggcactaatagtgaaaatttgacctatttgccatcgctactgttt
caagacttagagtgcttagataatctaagaggtcttggaatttgcgtagaagataaatca
caactctatagacttactgagttgtccaatgtctcagttcgatggctcgttatcagcaag
ctcgagaaatcaacttccttgtccttgtcggctggctttctcggggaagagcgaatccag
atgaacttagcttacctccgttttgtgaatagtgatgtgacccaagtagtgattgaaggt
aaccatcaacaccctgcctggcatcttcgggcgcttgagggcctccgatttgagcatatg
catggtttagaagagataatatggaagggagtggttccggaagagctgtttcaatctctt
ctcttcttatatatagagtcttgtgttatgttgaagaacatttcatggattttgcatcta
ccatgccttaggattttgtacgtatctctctgttctaatgtgaggcagctaattgcttat
ggggcagagaattatgatgaaaatgtttcagatacagcaggaagggaggaagagaaagaa
atcacgtcgacatctaccttcccttgtctcaatgagatatacttttacgatctaccagag
atggtttccatttgccactctacagtcaatttcccggcattaagtcgtatgcgtgtcaag
aattgtccgaaatttaagaagctcccatttcgatcagatagcattccaaacaaattacag
ttcattgaaagccccaaacaatggtgggaaagtttagaatgggaaggcagcaggatcaga
tcttccttccaacctttctacaaagaaatatctgaggagtga
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