Typha angustifolia (narrow-leaf cattail): 140772385
Help
Entry
140772385 CDS
T11061
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140772385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140772385
Spliceosome [BR:
tang03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
140772385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
140772385
NCBI-ProteinID:
XP_072970539
LinkDB
All DBs
Position
12:join(819604..819606,819789..819854,820001..820138,820631..821523,821666..821736,822791..822893,823121..823196,823539..823646)
Genome browser
AA seq
485 aa
AA seq
DB search
MASLADSFLADLDELSDNEANPLDDEISDAGDMEEDGDDDMPDIESLNYDDLDSVSKLQK
TQRYNDIMQKVDEALQKGSEFSTQGTTLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIANEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKP
LSEESLQKTIDACDRALALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVASKLMGTAGGL
SALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYLEQAEIFQSTPPSLRTRACRLLAAK
STLAARVDSTRGDPTGKMGRNLREEVRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVAQNKLAA
KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHGNLLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggccagccttgctgattctttcttggcagatcttgatgaactgtctgacaatgaagcc
aatcctcttgatgatgagatttctgacgcaggagatatggaggaagatggtgatgacgat
atgcctgatattgagtcccttaattatgatgatctcgatagtgtttcaaaattgcaaaag
acacaacgttacaatgatatcatgcagaaagtggatgaggcactccagaaagggtctgag
ttttcaactcaaggaacaactttggaggatgatccagagtatcaacttattgttgattgc
aatgctttatcagtagacatagagaatgaaatcatcataattcataattttatacgcgac
aagtaccggttgaagtttccagagcttgaatcccttgttcatcatccaattgattatgct
cgggttgttaaaaaaattgcaaatgagatggacttaacccttgttgatttggaagggctt
ctgccttcagctattataatggtggtttctgttacagcatcaactactactggcaagccc
ctatcagaggagagcttacagaaaacaattgatgcatgtgatcgtgcccttgctcttgat
ttagcaaagaagaaagttcttgattttgtagagagtaggatgggatatattgcaccaaat
ctttctgctattgttggtagtgcagttgcatctaaactgatgggcactgctggtggtttg
tcagcattagcaaaaatgccagcttgtaatgttcagcttcttggggcaaagagaaaaaat
cttgctgggttttctactgcaacctctcaatttcgtgtaggatatcttgaacaagctgaa
atatttcagagcacacctccctctctaagaactcgtgcttgtcgattgttggctgcaaaa
tcaaccctagcagcaagagtagactcaacaagaggggatccaacaggcaagatgggaagg
aacttgcgagaagaagtccgcaagaagattgagaagtggcaggagccacctcctgcaaaa
cagccaaagcctcttcctgtcccagattcggagcctaaaaagaagagaggtggtcgtcgg
ctgcggaaaatgaaggaaagatacgcaattactgatatgcggaagcttgccaaccgaatg
caatttggagtgccagaggaaagttccttaggtgacggcttgggtgaaggctatggcatg
cttggtcaagcaggaagcggaaagttgcgtgtttcagttgcacaaaataaacttgctgcc
aaagtggctaaaaagtttaaggagaagaactacggtagcagtggtgcaacatccggactg
acatccagtctggcatttacacctgtacagggtatagaacttacaaacccacaagcccat
gggaacctgcttggtagtggaacacagagcacctacttctctgagacagggaccttttca
aagatcaaaagaacttga
DBGET
integrated database retrieval system
