Typha angustifolia (narrow-leaf cattail): 140772600
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Entry
140772600 CDS
T11061
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140772600
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140772600
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140772600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4
vWA-TerF-like
Prok-RING_4
zf-C3HC4_2
zf-RING_2
Sina_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
140772600
NCBI-ProteinID:
XP_072970848
LinkDB
All DBs
Position
12:complement(join(7593095..7593175,7593434..7593490,7593615..7593795,7594754..7594881,7594978..7595083,7595258..7595337,7596081..7596178,7596273..7596386,7596472..7596612,7596685..7596769,7599040..7599276))
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AA seq
435 aa
AA seq
DB search
MGASNSRETGAEWSYPQEPSWEQSYSQGNPSYPPPAYDYSATYSRNPPETSQAPGAGGRR
PRLDRRYSRISDDYHSVDQVTEALAHAGLESSNLIVGVDFTKSNEWTGKHSFNRHSLHHI
GDAPNPYEQAISIIGRTLSKFDEDNLIPCYGFGDASTHDQDVFSFRPDGRPCNGFSEALT
RYRELIPQLHLSGPTSFAPIIEMAMTIVEQSGGQYHVLLIIADGQVTRSADTVPGHFSSQ
EQKTVDAIVKASAFPLSIVLVGVGDGPWDMMKEFDDNIPARSFDNFQFVNSTEIMSKNMP
QSRKEAAFALAALMEIPSQYQATVELGILGRHSGWSPERVALPPPSAAYSFNSRSFSSNS
FKQSASTYPYPGYKVTPSTTPAPSDSSDNQVCPICLVSPKDMAFGCGHQTCGDCGQNLQS
CPICRSEIQMRIKLY
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgagcaattcacgagagacgggcgcagagtggagttatccgcaggagccatct
tgggagcagagttattcccagggaaacccgagttatccgccgccggcgtatgactattct
gccacttattcgcgcaatcccccggagacttcgcaggcgccgggagctggtggcaggagg
ccgaggttggatcggaggtattcgaggataagcgatgattaccattctgtggatcaggtc
accgaggctcttgcacatgctggccttgagtcgtcaaatcttattgttggcgttgatttc
acaaaaagcaatgaatggacaggtaaacactcattcaatagacacagcttacatcacatt
ggtgatgcaccaaacccctatgaacaagcaatatctatcattggacgtacattatccaaa
tttgatgaggataatttgattccatgctacggctttggagatgcatcaacgcatgatcaa
gatgtctttagtttccgcccagatgggagaccctgcaatggattttcagaggctcttacg
cgatatagagaacttatcccacagttgcatttgtctggtcctacctcctttgctcccatt
attgaaatggcaatgacaattgtggaacagagtggtggacagtaccatgttttattgata
attgctgatggtcaggttacaaggagtgcagatactgtacctggacatttcagctcccaa
gagcaaaagactgttgatgccattgtaaaagccagtgcttttccgttgtccattgtgctg
gttggagttggtgatggaccttgggacatgatgaaagaatttgatgataacattccagct
cgatcctttgataacttccagtttgtgaattctacagagataatgtctaaaaacatgccg
caatcaagaaaggaggctgcatttgctcttgcagctttaatggaaataccctcacaatat
caggcaacagtggaactggggatattaggacgtcactctggttggtctccggaaagggtt
gcgcttccaccgccgagtgctgcttattcctttaattctagaagttttagttcaaacagt
ttcaagcagagtgcatcaacttacccttatcctgggtataaggtgacgccaagtactact
cctgcacccagtgattcatcagataatcaggtttgccccatttgccttgtgagcccgaag
gacatggctttcgggtgtggacatcagacttgcggggattgtggccaaaacctccaatca
tgccccatctgtcgtagtgaaatccaaatgagaataaagctgtactga
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