Typha angustifolia (narrow-leaf cattail): 140772610
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Entry
140772610 CDS
T11061
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tang03036
]
140772610
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tang04812
]
140772610
Chromosome and associated proteins [BR:
tang03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
140772610
Microtubules and associated factors
gamma-tubulin ring complex
140772610
Cytoskeleton proteins [BR:
tang04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
140772610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_RIG_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_HPS5
EIF3I
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
WD_LRWD1
NBCH_WD40
PROPPIN
KNTC1_N
NYD-SP28_assoc
Motif
Other DBs
NCBI-GeneID:
140772610
NCBI-ProteinID:
XP_072970860
LinkDB
All DBs
Position
12:complement(join(8651002..8651109,8652503..8652688,8652792..8653391,8653569..8654105,8661834..8662055,8662161..8662226,8662763..8662867,8662964..8663224,8663907..8664019,8664882..8665038))
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AA seq
784 aa
AA seq
DB search
MGLVDPSAPLLATCGGDTVKLFDVTVDAGDPCILSYSPTPGSQVNSVKWNHTNLVVASAG
DDKKISLWHKKGQSMGVVPLSSTDFGDDIEESIGSISFSNKGSRYLCSGGSGHIVRIWDL
QRKRCIKWLSGHTGIITGVMYNCKDEHLASISVKGDLILHNLASGARAAELKDPNGQVLR
VLDYSRLSRHVLVVAGDDGSVHLWDTTARSPKISWLKQHSAPTTGVCFSPSSDKIIASVG
LDKKLYMFDSGTRRSTCCIPFEVPFSSLVYKDDGNILAAGTNSGRVVFYDVRGKPQPFTV
LRAYNSSEAVTSLCWQRSKPVLVNENNCTAEVALLGGTSEESILMPDPLPSISASSFSSG
TTVSSFRSSLTTNTSGSASTTLNPSAAEETPHRGRIFTGGFLSKLQAPRGSHNLKDDMDV
FSPLVDVQPITPSLGNWWDDHDQTKKDNIVDKKPILLPTSTKKFQLNEGNADVHPISDWR
SISSSRQDDAMSLAATPVASSKNDSSMSSASEVWSGNASADSPSYHRQQTSLSRFLPSVS
VLNGSTFAGLQDSSLSSGMLSKNSLTNPGISSMNLQGKATFNSTNSLDSLSAYHPSSVST
SLGTKTIPSLTNSELPGSVLSNTPWRYSTYAERISTTSAFSEGIATAAGSPKLKKTGAET
REELLHSLQLRQEASTASGTGSLVASNGVAPQSLQALGPRTDQQQGTSSFSLQLVQRTMD
ESLESLQRSIHEDVRNLHIELLRQFHMHEMEMSSVLTSIMEKQDALIKEVQSLRKENQHL
RQLL
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggggctcgtggatccgtcggcgccgctgcttgccacgtgcggaggcgacaccgtgaag
ctcttcgacgtcacggtggatgccggcgatccgtgcatcctgagctactcgccaaccccc
ggatcacaagtgaactcggtgaaatggaatcacaccaatctggtagttgcaagcgcagga
gatgataaaaagatctctctctggcataagaaaggtcaaagtatgggtgtggtaccactt
tcaagtactgattttggagacgatatagaggaatctataggttccatcagcttcagcaat
aaaggttctagatatctttgctctggaggtagtggtcatattgtcagaatatgggattta
cagaggaaacgctgcatcaaatggctcagtggtcatactggtataattactggtgtcatg
tataattgtaaggatgagcatttggcatccatcagtgtcaaaggtgatcttattcttcac
aacctcgcttctggggcacgtgcagctgaactcaaagacccaaatgggcaggttttaaga
gtgcttgattattctcggcttagtcgacatgtgttagttgtagctggtgacgatggttct
gtacatctctgggatacaacagccaggagtccaaagatttcttggttgaaacaacattct
gcaccaaccactggtgtttgcttctcaccttcaagcgacaagataattgctagtgttggc
cttgataaaaagttatatatgtttgattctgggacaagaagatccacgtgttgcattcct
tttgaggtacctttctcctcattagtatataaagatgacggtaatattctggctgctgga
acaaacagtggccgcgtggtattctatgatgttcgtggaaagcctcaacctttcactgtt
cttcgtgcatacaatagctcagaggctgttacaagtttatgttggcaaagatcaaagcct
gtccttgtaaatgagaataattgtactgctgaagttgctcttcttggaggtactagtgaa
gaatcaattcttatgccagatcccttgccttctatatcagcctcaagtttttcatcagga
acaacggtgtctagtttccgctcttctttgacaacaaacaccagtggttcggcatcaact
actttaaacccttctgcagcagaggaaactcctcatagaggtcgaatattcacaggtgga
tttctatcaaagctgcaggcacctcggggaagccataacttaaaggatgatatggatgtt
ttttctccactagttgatgttcagccaattacaccatctcttggcaattggtgggatgac
catgatcaaacaaaaaaagacaatattgttgataagaagcctatactgcttccaacctca
accaagaagtttcagcttaacgaaggaaatgctgatgtacatccaatctcagattggagg
tctatttcaagctccagacaggatgatgctatgtctttagctgctacacctgttgcatcc
tcaaaaaatgactcatctatgtcttctgcttctgaggtctggagtggaaatgcatcagca
gatagtccaagttatcaccgtcaacagacatcactctcacgctttctgccttcagtatca
gtgctcaatgggtccacatttgcaggcttgcaagattcatctttatccagtggcatgtta
tccaagaattctttaacaaatcctggcataagttctatgaatcttcaaggcaaagccacc
tttaacagtacaaattctttggattctttatcagcttatcatccaagttcagtttccaca
tccttggggactaagaccataccatcattaactaattccgagttaccagggtcagttcta
tcaaataccccatggagatattccacctatgctgagagaataagcaccacctctgccttc
agtgaaggaatagctacagcagcaggttcaccaaaattgaaaaaaacgggagcagaaact
agagaggagctgttacatagcttgcaattgaggcaagaagcatcaactgcctctggaaca
gggagccttgtggcgagcaatggagtggcaccgcaatctttgcaagccttaggtccacgg
acagatcaacagcagggaacttcttccttttcacttcagctagtccaacgcactatggat
gaaagtctggaatctcttcagaggtccatccatgaagatgtgaggaatcttcacattgag
ttgctaagacaattccatatgcatgagatggagatgtcgagtgtccttacctctatcatg
gaaaagcaggatgcgttgataaaagaagtgcaatcgctacggaaggagaaccagcatctc
cgccaattactctaa
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