KEGG   Typha angustifolia (narrow-leaf cattail): 140772618
Entry
140772618         CDS       T11061                                 
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16-like
  KO
K14791  periodic tryptophan protein 1
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tang03009]
    140772618
Ribosome biogenesis [BR:tang03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    140772618
  Pre-60S particles
   Other pre-60S particles
    140772618
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EIPR1 WD40_Gbeta Beta-prop_EML_2 DSE1_N Beta-prop_TEP1_2nd Beta-prop_Aladin WD40_WDHD1_1st Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_TEP1_C PAC11 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_WDR75_2nd Beta-prop_SCAP MIOS_WD40 WD_LRWD1 CFAP251_N Beta-prop_WDR41 Beta-prop_IFT140_1st DNAI3_WD Beta-prop_VPS8 BBS2_Mid Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 140772618
NCBI-ProteinID: XP_072970873
LinkDB
Position
12:complement(join(11308858..11308944,11309019..11309096,11309345..11309407,11309490..11309519,11309630..11309773,11309989..11310087,11310850..11310924,11311263..11311359,11311450..11311517,11312020..11312088,11312196..11312254,11312371..11312494,11313015..11313110,11313198..11313277,11313357..11313547,11313672..11313790))
AA seq 492 aa
MISAICWVPKGASKIVPLVVEPPSKEEIEEILKNDSQETREDSEEEEEGMDVDTHVDVDE
VARAVSAAQALGKNQGNKSSNDLQNIADSLRELDMDHYDDEDEGIELFSTGMGDLYYASN
EMDPYLQNKDDDDEEEIDDMVIKPTDAVIVCARNEDEVSHLEVWIYEESEDGEPNMYVHH
DVILPAFPLCTAWLDCNLKGGDKGNFIAVGSMEPAIEIWDLDLIEEVQPLVVLGGLSKKK
KAKGKKTKKYKKGSHRDSVLGLAWNKEVRNVLASASADNTAKIWDVVAAKCVVTFEHHND
KVQAVAWNRHSPEILLSGSFDQSVVMMDMKSSQQACHKWSVTAEVESLAWDPFSEHSFVV
SLENGTVQGFDKRTASSNSSCLSKPTFILHAHEKAVSSVSFNPSAPNLLATGSTDKMVKL
WDLSNNQPSCVASQNPKAGAVFSISFSEDSPFLLAIGGSKGRSKVWDTLCDPGVVRSFGK
YSSGRIDPNSSA
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgatttctgccatatgctgggttccaaagggggcttcaaagattgttccactggtagtg
gagcctccttctaaagaggaaatagaggagatattgaagaatgactcgcaagaaacaaga
gaagacagtgaagaagaagaagaaggaatggatgtagacactcacgtggacgtagatgaa
gtagcacgtgcggtgtctgcagcacaagcccttggaaagaaccaaggcaataagagctct
aatgatctccaaaacattgctgatagccttcgggaactggacatggatcattatgatgac
gaggatgaaggtattgagctatttagtactggaatgggagacctttattatgcgagtaat
gaaatggacccctatctacaaaataaggatgatgatgatgaagaagagattgatgacatg
gtaataaaacctacggatgccgttatagtttgtgcacgtaatgaggatgaagtcagtcat
cttgaggtttggatttatgaggaatcagaagatggagaaccaaacatgtatgttcatcat
gatgtcatccttcctgcttttcccctttgcacagcttggcttgactgcaatcttaaaggt
ggtgataaagggaattttatagctgtgggttcaatggaacctgctattgagatatgggat
ctggatcttattgaggaggtccaacctcttgtggtattagggggtctgtcaaagaagaaa
aaggcgaaggggaaaaagacaaaaaagtacaagaagggtagccatagagattctgtactt
ggtcttgcatggaacaaggaggtgaggaatgttttagccagtgcaagtgctgacaacaca
gccaagatttgggatgtagttgctgcgaaatgtgttgtcacatttgaacatcacaatgac
aaggttcaagcagttgcatggaacaggcactctcctgaaatactacttagtggatctttt
gatcaatcagttgtcatgatggatatgaaatctagtcaacaggcttgtcataaatggtct
gtcacagcagaggttgagagcttggcatgggaccccttcagcgaacactcatttgtggtc
agtcttgaaaatggtacagtacaaggtttcgacaagcgcacagcttcatcaaattcaagt
tgtctttcgaagccaactttcattcttcatgcacacgagaaagctgtctcttctgtctct
ttcaacccatctgctcctaatcttcttgcaaccggttcaacagataaaatggtgaaactc
tgggacttatcaaacaaccaaccatcatgcgttgcatcacagaatccaaaagctggagct
gtcttctctatatccttttcggaggacagccctttcttgttggccattggagggtccaag
ggacgatctaaagtatgggacaccttatgcgatccaggggttgttcgtagctttggcaag
tatagcagtggaagaattgatccaaattcctccgcttga

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