Typha angustifolia (narrow-leaf cattail): 140772686
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Entry
140772686 CDS
T11061
Name
(RefSeq) PHD finger protein ALFIN-LIKE 5-like isoform X1
KO
K26274
PHD finger protein ALFIN-LIKE
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tang03000
]
140772686
Transcription factors [BR:
tang03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
140772686
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alfin
PHD
Zn_Ribbon_TF
DUF4746
PFF1_TM
Pox_Ag35
DUF4611
TMEM214
NPR3
RNA_pol_3_Rpc31
PHD_NSD
YqfQ
Motif
Other DBs
NCBI-GeneID:
140772686
NCBI-ProteinID:
XP_072970973
LinkDB
All DBs
Position
12:complement(join(7062171..7062443,7062531..7062660,7075515..7075743,7076823..7076855,7076971..7077070))
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AA seq
254 aa
AA seq
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MEGGAAAYNSRTAEEVFRDFRGRRAGMIKALTNDVEKFYQLCDPEKENLCLYGLPNETWE
VNLPAEEVPPELPEPALGINFARDGMDEKDWLALVAVHSDAWLLAVAFYFAARFGFDKEA
RMRLFNMINNLPTIYEVVTGAAKKQTKEKTPHNSSKSNKSGSKTQPRQENTKASKMAPPK
DDEESGEEEDEEDEEEHGNTLCGACGSAHDDFWICCDVCERWFHGKCVRITPAKAEHIKQ
YKCPDCSTNKRARA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcggcgctgcggcgtacaattctcgcaccgcggaggaggtcttccgcgatttc
cgaggccggcgagccggcatgatcaaggctctcaccaacgatgtcgagaaattctaccag
ctttgtgatcccgagaaggagaacttgtgtctttatggacttcctaatgagacttgggag
gtaaacttgccagctgaggaagtacctccggagcttcctgaaccagcattgggcatcaat
tttgctagggatggaatggatgagaaggattggttggcacttgttgctgttcacagtgat
gcatggttattggctgttgcattctacttcgcagcacgttttggatttgataaagaggcc
aggatgaggttgttcaacatgatcaacaatctcccaacgatatatgaggttgtgactgga
gctgcaaagaagcaaaccaaggagaagacccctcacaatagcagcaagagcaacaaatcc
gggtctaagacgcagccaagacaggaaaatacaaaggcctcaaagatggcgccccctaaa
gatgatgaagaaagtggagaagaggaggatgaagaagatgaagaggaacatggcaacacg
ctctgtggagcatgcggcagtgctcatgatgatttttggatatgttgtgatgtctgtgag
cgatggttccatggaaagtgcgtccggattacacctgcaaaagctgagcatattaaacag
tacaaatgcccggattgcagcaccaacaagagggctagggcataa
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