Typha angustifolia (narrow-leaf cattail): 140772839
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Entry
140772839 CDS
T11061
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140772839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140772839
Spliceosome [BR:
tang03041
]
Common components
Common spliceosomal components
SR proteins
140772839
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
YflT
Motif
Other DBs
NCBI-GeneID:
140772839
NCBI-ProteinID:
XP_072971150
LinkDB
All DBs
Position
13:complement(join(2167061..2167066,2167155..2167320,2167391..2167600,2168229..2168300,2168675..2168741,2168864..2168943,2169059..2169137,2169216..2169291))
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AA seq
251 aa
AA seq
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MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFA
FVRYKYADEAQKAVEKLDGRNVDGRNIMVQFAKYGPNAERIHKGRIVEVVPRTKGRSRSH
SPRPRHRDDYRDREYRRRSRSRSRDRYGRDRYSGRERDYHRRSRSRSLSADYYRGSGRGR
SPDDRRRSRSRSYDSASPARRSFSPRSPRQSASPRRTPPSRGESPENDINGERSPPSRGV
SRSPARSFDED
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatttcgggagatcgggtcctccggacatcagagacaccttctctctcctcgtc
ctcaacattagcttccgtaccacggcggatgatctatatcccctctttgatcgttacggg
aaggtggtggatgtcttcatcccgagggatcgcaggactggggattcacgtgggtttgcc
ttcgtgaggtacaagtatgctgatgaggctcagaaagcagtggaaaagctcgatggacga
aatgtggatggtcgtaatattatggttcagtttgcgaagtatgggcctaacgctgagcga
attcacaaagggagaattgtagaagtagttcctcgaacaaagggaaggtcaagaagccac
agcccgaggccaaggcatagggatgattatcgagacagagaatataggaggcgaagtcgc
agtagaagcagagacagatatgggcgcgacaggtatagcggcagggaaagagattatcac
cgtcgaagcagaagccgcagtttgagtgctgattattatagaggcagtggtagaggaagg
tcaccagatgatcgtcgaaggagcaggagccgttcatatgatagtgcctcccctgcacgc
cgcagctttagtcctcgtagtcctcgtcagagtgcttcacctcgcaggacacccccttct
cgtggtgaaagccctgagaatgatatcaatggggagaggtcccctccttcacgaggtgtt
tctcgcagtcctgcacgcagctttgatgaggactga
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